RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 CLNS1AP54105 237 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 DPY19L1Q2PZI1 675 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 CASP12Q6UXS9 341 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 OR10H5Q8NGA6 315 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 CNOT9Q92600 299 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 FKRPQ9H9S5 495 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 MALT1Q9UDY8 824 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 TMED7Q9Y3B3 224 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 ATP23Q9Y6H3 246 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 CLDN24A6NM45 220 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 GPRIN2O60269 458 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 EDF1O60869 148 aaKnown RBP16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 VIMP08670 466 aaKnown RBP16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 LBPP18428 481 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 ANXA11P50995 505 aaKnown RBP16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 POLR2HP52434 150 aaKnown RBP16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 GUCY1A3Q02108 690 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 TGFBR3Q03167 851 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 CHRNB3Q05901 458 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 SPOCK1Q08629 439 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 FUT5Q11128 374 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 GNA13Q14344 377 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 SPANXN4Q5MJ08 99 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 C9orf135Q5VTT2 229 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 C11orf71Q6IPW1 123 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 ZNF544Q6NX49 715 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 CMIPQ8IY22 773 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 OR52E4Q8NGH9 312 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 TNFRSF13CQ96RJ3 184 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 INPP5KQ9BT40 448 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 C20orf27Q9GZN8 174 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 MTHFD2LQ9H903 347 aaPredicted RBP16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 MEAF6Q9HAF1 191 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 FAM53CQ9NYF3 392 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 SLC9A8Q9Y2E8 581 aa16.53■□□□□ 0.24
GTF3C1-207ENST00000567806 HMGN4O00479 90 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 ZNF208O43345 1280 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 ITGA5P08648 1049 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 UQCRBP14927 111 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 MAP2K6P52564 334 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 FOXG1P55316 489 aaPredicted RBP16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 H3F3AP84243 136 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 FAM174BQ3ZCQ3 159 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 RNF130Q86XS8 419 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 TRIML2Q8N7C3 387 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 WDR31Q8NA23 367 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 TRNT1Q96Q11 434 aaKnown RBP16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 BTNL2Q9UIR0 455 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 DCTN4Q9UJW0 460 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 OSGIN1Q9UJX0 560 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 AMDHD2Q9Y303 409 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 PMF1-BGLAPU3KQ54 211 aa16.52■□□□□ 0.24
GTF3C1-207ENST00000567806 CR1P17927 2039 aa16.52■□□□□ 0.23
GTF3C1-207ENST00000567806 ALPK2Q86TB3 2170 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 TMEM72A0PK05 275 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 PRAMEF27A3QJZ7 478 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 CCDC154A6NI56 674 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 AGAP5A6NIR3 686 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 E9PBE3 544 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 AP3D1O14617 1153 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 SLC25A16P16260 332 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 IL7RP16871 459 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 TACR3P29371 465 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 SLC1A3P43003 542 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 TXNL4AP83876 142 aaKnown RBP16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 LOXL1Q08397 574 aaPredicted RBP16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 SYPL1Q16563 259 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 TMEM249Q2WGJ8 235 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 LRRC74BQ6ZQY2 392 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 C17orf78Q8N4C9 275 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 ANKFN1Q8N957 763 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 C1orf162Q8NEQ5 155 aaPredicted RBP16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 TMEM158Q8WZ71 300 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 FAM168AQ92567 244 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 HTRA1Q92743 480 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 CCDC115Q96NT0 180 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 KCNK17Q96T54 332 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 NUF2Q9BZD4 464 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 SLC17A5Q9NRA2 495 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 SLC7A10Q9NS82 523 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 PNPOQ9NVS9 261 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 FLVCR1Q9Y5Y0 555 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 USH1CQ9Y6N9 552 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 MXRA5Q9NR99 2828 aa16.51■□□□□ 0.23
GTF3C1-207ENST00000567806 CFAP73A6NFT4 308 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 ELOA3DA6NLF2 546 aaPredicted RBP16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 H7C417 338 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 PDLIM1O00151 329 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 NR2F1P10589 423 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 KITP10721 976 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 IMPDH2P12268 514 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 APOBEC3AP31941 199 aaPredicted RBP16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 NME5P56597 212 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 PRPS1P60891 318 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 SLC17A1Q14916 467 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 ELOA3BQ3SY89 546 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 C1QTNF12Q5T7M4 302 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 PAQR6Q6TCH4 344 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 B3GLCTQ6Y288 498 aa16.5■□□□□ 0.23
GTF3C1-207ENST00000567806 ZNF621Q6ZSS3 439 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms