RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GKN3PP0CG01 181 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 IMPDH2P12268 514 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 BMP2P12643 396 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 PAX1P15863 534 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 HOXB9P17482 250 aaPredicted RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 GGT1P19440 569 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 CCNA2P20248 432 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 IGHV1-2P23083 117 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 PPIBP23284 216 aaKnown RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 CXCR1P25024 350 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 EDNRAP25101 427 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TACR3P29371 465 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 ACAA2P42765 397 aaKnown RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 IDH3AP50213 366 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 ATP4BP51164 291 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 OR2B6P58173 313 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 COPZ1P61923 177 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 CAPRIN1Q14444 709 aaKnown RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 PPA1Q15181 289 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 RGNQ15493 299 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TSC22D1Q15714 1073 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TAB1Q15750 504 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 GTDC1Q4AE62 458 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TTMPQ5BVD1 217 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 Q5PR19 223 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TIMM23BQ5SRD1 257 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 NCMAPQ5T1S8 102 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 LRIF1Q5T3J3 769 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 FBXW9Q5XUX1 488 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 WBP2NLQ6ICG8 309 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 ADAM5Q6NVV9 412 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 SLC2A7Q6PXP3 512 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 PAQR6Q6TCH4 344 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 SEZ6L2Q6UXD5 910 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 ZNF836Q6ZNA1 936 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 HDXQ7Z353 690 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 BIVMQ86UB2 503 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 VRK2Q86Y07 508 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 P3H2Q8IVL5 708 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 FUNDC1Q8IVP5 155 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 CCDC103Q8IW40 242 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 UBE2J2Q8N2K1 259 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 ZNF433Q8N7K0 673 aaPredicted RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 ZNF611Q8N823 705 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 BBS10Q8TAM1 723 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TMEM171Q8WVE6 324 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 IGFBPL1Q8WX77 278 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 STON2Q8WXE9 905 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 SLC35B4Q969S0 331 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 FBXW5Q969U6 566 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 APH1AQ96BI3 265 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 MUCL1Q96DR8 90 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 SPDL1Q96EA4 605 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 DNAJA3Q96EY1 480 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 PERPQ96FX8 193 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 AURKBQ96GD4 344 aaPredicted RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 TMEM19Q96HH6 336 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 C18orf12Q96KH6 178 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 MAGEB18Q96M61 343 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 EBF4Q9BQW3 602 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 SPATA9Q9BWV2 254 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 GSX2Q9BZM3 304 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 CXorf56Q9H5V9 222 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 PIF1Q9H611 641 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 VIPAS39Q9H9C1 493 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 BCL2L10Q9HD36 194 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 A4GALTQ9NPC4 353 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 INTS9Q9NV88 658 aaKnown RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 RLIMQ9NVW2 624 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 ARGLU1Q9NWB6 273 aaPredicted RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 PARPBPQ9NWS1 579 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 ASB6Q9NWX5 421 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TAS2R16Q9NYV7 291 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 CCDC167Q9P0B6 97 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 MALT1Q9UDY8 824 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 SLC9A8Q9Y2E8 581 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 NOSIPQ9Y314 301 aaKnown RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 IFT52Q9Y366 437 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 RNF115Q9Y4L5 304 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 GMEB1Q9Y692 573 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 HEATR1Q9H583 2144 aaKnown RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 ARID1AO14497 2285 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CIB4A0PJX0 185 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ZC3H12DA2A288 527 aaKnown RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 LIPT2A6NK58 231 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 OR5H1A6NKK0 313 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 AQP7P3A6NL99 342 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 A8MVM7 634 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 FAM171A2A8MVW0 826 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 EVPLLA8MZ36 301 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 NR5A2O00482 541 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CLOCKO15516 846 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 RAMP1O60894 148 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 PGM3O95394 542 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 INHBBP09529 407 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 VSIG8P0DPA2 414 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ARAFP10398 606 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 PRG2P13727 222 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ETS2P15036 469 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 NCF2P19878 526 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms