RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 BGNP21810 368 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 EPS8Q12929 822 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 ELOA3BQ3SY89 546 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 CLEC2AQ6UVW9 174 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 CASP12Q6UXS9 341 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 ZNF621Q6ZSS3 439 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 CROCCP2Q86T23 111 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 PEX5LQ8IYB4 626 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 GLB1L3Q8NCI6 653 aaPredicted RBP13.16□□□□□ -0.3
RNF40-209ENST00000566703 ELOA3Q8NG57 546 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 OR52E4Q8NGH9 312 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 WDR60Q8WVS4 1066 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 TEX37Q96LM6 180 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 OR52E6Q96RD3 313 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 ZBTB18Q99592 522 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 SLC7A10Q9NS82 523 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 JMJD1CQ15652 2540 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 A8MV72 311 aaPredicted RBP13.15□□□□□ -0.3
RNF40-209ENST00000566703 M0R1B8 84 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 SDHDO14521 159 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 GPIP06744 558 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 ALDOCP09972 364 aaKnown RBP13.15□□□□□ -0.3
RNF40-209ENST00000566703 SLC25A16P16260 332 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 MPGP29372 298 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
RNF40-209ENST00000566703 FOXG1P55316 489 aaPredicted RBP13.15□□□□□ -0.3
RNF40-209ENST00000566703 PRPS1P60891 318 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 CHRNB3Q05901 458 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 LOXL1Q08397 574 aaPredicted RBP13.15□□□□□ -0.3
RNF40-209ENST00000566703 MPP2Q14168 576 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 MRPL2Q5T653 305 aaKnown RBP13.15□□□□□ -0.3
RNF40-209ENST00000566703 TSPO2Q5TGU0 170 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 ABHD12BQ7Z5M8 362 aaPredicted RBP13.15□□□□□ -0.3
RNF40-209ENST00000566703 HMGN2P46Q86SG4 172 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 POMGNT2Q8NAT1 580 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 KCNK9Q9NPC2 374 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 OBP2BQ9NPH6 170 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 PNPOQ9NVS9 261 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 CALML5Q9NZT1 146 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 GPR45Q9Y5Y3 372 aa13.15□□□□□ -0.3
RNF40-209ENST00000566703 CHD3Q12873 2000 aaKnown RBP13.14□□□□□ -0.31
RNF40-209ENST00000566703 IGHV4-30-2A0A087WSY4 118 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 A0A096LNT2 108 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 A0A1W2PR80 420 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 ZC3H12DA2A288 527 aaKnown RBP13.14□□□□□ -0.31
RNF40-209ENST00000566703 FAM234BA2RU67 622 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 SLCO1B7G3V0H7 640 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 HDAC3O15379 428 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 VAMP5O95183 116 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 WNT11O96014 354 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 C1QCP02747 245 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 IL6P05231 212 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 CSF3P09919 207 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 PTNP21246 168 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 CXCR1P25024 350 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 IL12AP29459 219 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 BST1Q10588 318 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 OTUD3Q5T2D3 398 aaPredicted RBP13.14□□□□□ -0.31
RNF40-209ENST00000566703 B3GLCTQ6Y288 498 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 PROX1Q92786 737 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 ATP23Q9Y6H3 246 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 PMF1-BGLAPU3KQ54 211 aa13.14□□□□□ -0.31
RNF40-209ENST00000566703 TLN2Q9Y4G6 2542 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 CDHR4A6H8M9 788 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 LIPT2A6NK58 231 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 TRPC5OSA6NMA1 111 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 RFXANKO14593 260 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 ZCCHC18P0CG32 403 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 CDKN2CP42773 168 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 EFNA4P52798 201 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 NME5P56597 212 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 VLDLRP98155 873 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 SPOCK1Q08629 439 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 COX20Q5RI15 118 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 TMEM225Q6GV28 225 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 WBP2NLQ6ICG8 309 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 AAED1Q7RTV5 226 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 TMEM99Q8N816 258 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 OR9K2Q8NGE7 335 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 OR52P1PQ8NH57 321 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 PARD6BQ9BYG5 372 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 THAP1Q9NVV9 213 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 TMEM160Q9NX00 188 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 THUMPD1Q9NXG2 353 aaKnown RBP13.13□□□□□ -0.31
RNF40-209ENST00000566703 P2RX2Q9UBL9 471 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 ABCA1O95477 2261 aa13.13□□□□□ -0.31
RNF40-209ENST00000566703 OR6C65A6NJZ3 312 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 AQP7P3A6NL99 342 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 A8MVM7 634 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 GPRIN2O60269 458 aa13.12□□□□□ -0.31
RNF40-209ENST00000566703 GSNP06396 782 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms