RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ARMC7Q9H6L4 198 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 RLIMQ9NVW2 624 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 ZNF232Q9UNY5 417 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 MAGED1Q9Y5V3 778 aaPredicted RBP17.78■□□□□ 0.44
CLN6-207ENST00000566347 HIVEP2P31629 2446 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 ZC3H12DA2A288 527 aaKnown RBP17.77■□□□□ 0.44
CLN6-207ENST00000566347 FAM234BA2RU67 622 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 ABCD4O14678 606 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 GPIP06744 558 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 THBS1P07996 1170 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 NTF4P34130 210 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 IDUAP35475 653 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 CDH11P55287 796 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 FAPQ12884 760 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 PGGHGQ32M88 737 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 WBP2NLQ6ICG8 309 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 KLHL17Q6TDP4 642 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 TMEM108Q6UXF1 575 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 OR9I1Q8NGQ6 314 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 VPS33AQ96AX1 596 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 RAD21L1Q9H4I0 556 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 ALG2Q9H553 416 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 CISD1Q9NZ45 108 aaKnown RBP17.77■□□□□ 0.44
CLN6-207ENST00000566347 NPAP1Q9NZP6 1156 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 MGAT4BQ9UQ53 548 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 ZNF443Q9Y2A4 671 aaPredicted RBP17.77■□□□□ 0.44
CLN6-207ENST00000566347 FLVCR1Q9Y5Y0 555 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 USH1CQ9Y6N9 552 aa17.77■□□□□ 0.44
CLN6-207ENST00000566347 A0A0G2JPF8 293 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 HNRNPCL2B2RXH8 293 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 SHISA9B4DS77 424 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 HNRNPCL3B7ZW38 293 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 HNRNPCL1O60812 293 aaKnown RBP17.76■□□□□ 0.43
CLN6-207ENST00000566347 GKN3PP0CG01 181 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 HNRNPCL4P0DMR1 293 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 ACAA2P42765 397 aaKnown RBP17.76■□□□□ 0.43
CLN6-207ENST00000566347 SLC17A1Q14916 467 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 EPGNQ6UW88 154 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 OR52N5Q8NH56 324 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 AURKBQ96GD4 344 aaPredicted RBP17.76■□□□□ 0.43
CLN6-207ENST00000566347 TMEM19Q96HH6 336 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 MUS81Q96NY9 551 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 GRIP2Q9C0E4 1043 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 UPB1Q9UBR1 384 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 DCTN4Q9UJW0 460 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 IFT52Q9Y366 437 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 SLC25A15Q9Y619 301 aa17.76■□□□□ 0.43
CLN6-207ENST00000566347 LIPT2A6NK58 231 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 PTAFRP25105 342 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 MRPL19P49406 292 aaKnown RBP17.75■□□□□ 0.43
CLN6-207ENST00000566347 STX1BP61266 288 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 TGFBR3Q03167 851 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 TNK1Q13470 666 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 CEACAM7Q14002 265 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 GABRA6Q16445 453 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 CLEC12BQ2HXU8 276 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 GTDC1Q4AE62 458 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 OTUD3Q5T2D3 398 aaPredicted RBP17.75■□□□□ 0.43
CLN6-207ENST00000566347 C1QTNF12Q5T7M4 302 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 AGBL2Q5U5Z8 902 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 PRAMEF8Q5VWM4 474 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 PRAMEF7Q5VXH5 474 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 DTX2Q86UW9 622 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 CADM2Q8N3J6 435 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 C1orf162Q8NEQ5 155 aaPredicted RBP17.75■□□□□ 0.43
CLN6-207ENST00000566347 GTF2H4Q92759 462 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 TMEM45BQ96B21 275 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 C7orf26Q96N11 449 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 TRAF4Q9BUZ4 470 aaPredicted RBP17.75■□□□□ 0.43
CLN6-207ENST00000566347 SF3B5Q9BWJ5 86 aaKnown RBP17.75■□□□□ 0.43
CLN6-207ENST00000566347 SPATA9Q9BWV2 254 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 PIF1Q9H611 641 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 PLCE1Q9P212 2302 aa17.75■□□□□ 0.43
CLN6-207ENST00000566347 A0A096LPI6 279 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 A8MVM7 634 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 PDLIM1O00151 329 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 POLR3GO15318 223 aaPredicted RBP17.74■□□□□ 0.43
CLN6-207ENST00000566347 TGDSO95455 350 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 ITGA5P08648 1049 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 NCF2P19878 526 aaPredicted RBP17.74■□□□□ 0.43
CLN6-207ENST00000566347 CDKN1AP38936 164 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 FADDQ13158 208 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 VEZF1Q14119 521 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 OR7A5Q15622 319 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 RPS26P11Q5JNZ5 115 aaPredicted RBP17.74■□□□□ 0.43
CLN6-207ENST00000566347 CLIP4Q8N3C7 705 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 C17orf78Q8N4C9 275 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 OR52E4Q8NGH9 312 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 SLC35B4Q969S0 331 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 TAPBPLQ9BX59 468 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 AMBRA1Q9C0C7 1298 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 PCDHB14Q9Y5E9 798 aa17.74■□□□□ 0.43
CLN6-207ENST00000566347 AQP7P3A6NL99 342 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 CLIC1O00299 241 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 AKR7A3O95154 331 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 ZNF83P51522 516 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 RGNQ15493 299 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 ZNF311Q5JNZ3 666 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 AGAP6Q5VW22 663 aa17.73■□□□□ 0.43
CLN6-207ENST00000566347 DEPDC4Q8N2C3 294 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms