RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 TSSK6Q9BXA6 273 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SLC25A19Q9HC21 320 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 NANSQ9NR45 359 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 PNPLA3Q9NST1 481 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 IL20RAQ9UHF4 553 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SPIN1Q9Y657 262 aaPredicted RBP27.63■■■□□ 2.01
CTCF-203ENST00000566078 MED12Q93074 2177 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 ZIC3O60481 467 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 RCBTB2O95199 551 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 AHSA1O95433 338 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 BGLAPP02818 100 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 GDF1P27539 372 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 ISL1P61371 349 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 LTBQ06643 244 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 ZBED5Q49AG3 693 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 RPL13AP3Q6NVV1 102 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 C3orf33Q6P1S2 294 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 SMARCD3Q6STE5 483 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 OR52L1Q8NGH7 329 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 UBL7Q96S82 380 aaPredicted RBP27.62■■■□□ 2.01
CTCF-203ENST00000566078 UBQLN3Q9H347 655 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 CSAG2Q9Y5P2 127 aa27.62■■■□□ 2.01
CTCF-203ENST00000566078 DMXL2Q8TDJ6 3036 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 PTP4A3O75365 173 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 MEOX1P50221 254 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 MAP2K6P52564 334 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 SMSP52788 366 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 CDC42P60953 191 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 CDK5Q00535 292 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 CD47Q08722 323 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 SELENBP1Q13228 472 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 ZNF800Q2TB10 664 aaPredicted RBP eCLIP27.61■■■□□ 2.01
CTCF-203ENST00000566078 SLC27A4Q6P1M0 643 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 LIPHQ8WWY8 451 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 TNFRSF13CQ96RJ3 184 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 SMAD5Q99717 465 aaKnown RBP27.61■■■□□ 2.01
CTCF-203ENST00000566078 MCCC2Q9HCC0 563 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 IMPAD1Q9NX62 359 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 HSPE1-MOB4S4R3N1 261 aa27.61■■■□□ 2.01
CTCF-203ENST00000566078 H3BML4 177 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 KLRC4-KLRK1H3BQV0 150 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 PEPDP12955 493 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 ZNF17P17021 662 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 RFC3P40938 356 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 GIPRP48546 466 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 FHL1Q13642 323 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 TMEM44Q2T9K0 475 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 C12orf73Q69YU5 71 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 LRRC69Q6ZNQ3 347 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 TMEM178AQ8NBL3 297 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 DTNBP1Q96EV8 351 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 TMEM185BQ9H7F4 350 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 FKRPQ9H9S5 495 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 B4GALT7Q9UBV7 327 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 RNF6Q9Y252 685 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 RAXQ9Y2V3 346 aa27.6■■■□□ 2.01
CTCF-203ENST00000566078 M0R129 80 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 TFPIP10646 304 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 BMP7P18075 431 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 CHN2P52757 468 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 MYBPC1Q00872 1141 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 CTU2Q2VPK5 515 aaKnown RBP27.59■■■□□ 2.01
CTCF-203ENST00000566078 GXYLT1Q4G148 440 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 SYT14P1Q58G82 188 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 FAM69AQ5T7M9 428 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 CASP12Q6UXS9 341 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 ENTHD1Q8IYW4 607 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 DEPDC4Q8N2C3 294 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 OR14L1PQ8NHC6 308 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 ZNF229Q9UJW7 825 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 LAMA5O15230 3695 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 OR2M5A3KFT3 312 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 TRAPPC6AO75865 159 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 ELK4P28324 431 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 GLYR1Q49A26 553 aaPredicted RBP27.59■■■□□ 2.01
CTCF-203ENST00000566078 ACSM5Q6NUN0 579 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 THSD4Q6ZMP0 1018 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 YRDCQ86U90 279 aaKnown RBP27.59■■■□□ 2.01
CTCF-203ENST00000566078 FAM83FQ8NEG4 500 aaPredicted RBP27.59■■■□□ 2.01
CTCF-203ENST00000566078 OR4Q3Q8NH05 313 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 UBE2FQ969M7 185 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 SLC25A36Q96CQ1 311 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 ARL5BQ96KC2 179 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 TTTY12Q9BZ98 90 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 ZNF703Q9H7S9 590 aaPredicted RBP27.59■■■□□ 2.01
CTCF-203ENST00000566078 RASSF1Q9NS23 344 aa27.59■■■□□ 2.01
CTCF-203ENST00000566078 CACNA1AO00555 2505 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 K7ENP7 123 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 MT-ATP6P00846 226 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 ASAH2BP0C7U1 165 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 PLGLB1Q02325 96 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 MAD2L1BPQ15013 274 aaPredicted RBP27.58■■■□□ 2.01
CTCF-203ENST00000566078 INO80CQ6PI98 192 aaPredicted RBP27.58■■■□□ 2.01
CTCF-203ENST00000566078 ZNF786Q8N393 782 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 OR2T33Q8NG76 320 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 CNIH3Q8TBE1 160 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 SLC25A43Q8WUT9 341 aaPredicted RBP27.58■■■□□ 2.01
CTCF-203ENST00000566078 PIGQQ9BRB3 760 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 OR2B2Q9GZK3 357 aa27.58■■■□□ 2.01
CTCF-203ENST00000566078 ENKD1Q9H0I2 346 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms