RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HNRNPCL3B7ZW38 293 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 SMAD7O15105 426 aaKnown RBP17.51■□□□□ 0.39
CLN6-206ENST00000565471 HNRNPCL1O60812 293 aaKnown RBP17.51■□□□□ 0.39
CLN6-206ENST00000565471 GKN3PP0CG01 181 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 HNRNPCL4P0DMR1 293 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 CXCR1P25024 350 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 SLC17A1Q14916 467 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 LARS2Q15031 903 aaKnown RBP17.51■□□□□ 0.39
CLN6-206ENST00000565471 WBP2NLQ6ICG8 309 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 OR7E24Q6IFN5 339 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 GTF2H4Q92759 462 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 TRMT61AQ96FX7 289 aaKnown RBP17.51■□□□□ 0.39
CLN6-206ENST00000565471 TMEM19Q96HH6 336 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 RADILQ96JH8 1075 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 RAD21L1Q9H4I0 556 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 ARMC7Q9H6L4 198 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 CACYBPQ9HB71 228 aaKnown RBP17.51■□□□□ 0.39
CLN6-206ENST00000565471 MAGED1Q9Y5V3 778 aaPredicted RBP17.51■□□□□ 0.39
CLN6-206ENST00000565471 NAV3Q8IVL0 2385 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 CADP27708 2225 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 CCT8L1PA6NM43 557 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 SHISA9B4DS77 424 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 PDLIM1O00151 329 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 TGDSO95455 350 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 GPIP06744 558 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 BMP2P12643 396 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 IDUAP35475 653 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 COPZ1P61923 177 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 FAPQ12884 760 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 FADDQ13158 208 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 RGNQ15493 299 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 PGGHGQ32M88 737 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 PRAMEF8Q5VWM4 474 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 PRAMEF7Q5VXH5 474 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 CASP12Q6UXS9 341 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 TMEM45BQ96B21 275 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 MUS81Q96NY9 551 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 SF3B5Q9BWJ5 86 aaKnown RBP17.5■□□□□ 0.39
CLN6-206ENST00000565471 SPATA9Q9BWV2 254 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 AMBRA1Q9C0C7 1298 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 GRIP2Q9C0E4 1043 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 PAIP1Q9H074 479 aaKnown RBP17.5■□□□□ 0.39
CLN6-206ENST00000565471 PIF1Q9H611 641 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 BCL2L10Q9HD36 194 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 FAIMQ9NVQ4 179 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 CISD1Q9NZ45 108 aaKnown RBP17.5■□□□□ 0.39
CLN6-206ENST00000565471 ZNF232Q9UNY5 417 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 MGAT4BQ9UQ53 548 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 IFT52Q9Y366 437 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 PCDHB14Q9Y5E9 798 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 SLC25A15Q9Y619 301 aa17.5■□□□□ 0.39
CLN6-206ENST00000565471 A0A096LPI6 279 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 LIPT2A6NK58 231 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 ABCD4O14678 606 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 ITGA5P08648 1049 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 PTAFRP25105 342 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 STX1BP61266 288 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 GABRA6Q16445 453 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 RPS26P11Q5JNZ5 115 aaPredicted RBP17.49■□□□□ 0.39
CLN6-206ENST00000565471 OTUD3Q5T2D3 398 aaPredicted RBP17.49■□□□□ 0.39
CLN6-206ENST00000565471 C1QTNF12Q5T7M4 302 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 TMEM108Q6UXF1 575 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 DTX2Q86UW9 622 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 CLIP4Q8N3C7 705 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 CADM2Q8N3J6 435 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 C1orf162Q8NEQ5 155 aaPredicted RBP17.49■□□□□ 0.39
CLN6-206ENST00000565471 OR52N5Q8NH56 324 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 SLC35B4Q969S0 331 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 GTPBP3Q969Y2 492 aaKnown RBP17.49■□□□□ 0.39
CLN6-206ENST00000565471 TRAF4Q9BUZ4 470 aaPredicted RBP17.49■□□□□ 0.39
CLN6-206ENST00000565471 A4GALTQ9NPC4 353 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 TCF7L2Q9NQB0 619 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 DCTN4Q9UJW0 460 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 CHST2Q9Y4C5 530 aa17.49■□□□□ 0.39
CLN6-206ENST00000565471 NSD1Q96L73 2696 aaPredicted RBP17.49■□□□□ 0.39
CLN6-206ENST00000565471 AQP7P3A6NL99 342 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 A8MVM7 634 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 CLIC1O00299 241 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 POLR3GO15318 223 aaPredicted RBP17.48■□□□□ 0.39
CLN6-206ENST00000565471 HOXB9P17482 250 aaPredicted RBP17.48■□□□□ 0.39
CLN6-206ENST00000565471 CDH11P55287 796 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 CEACAM7Q14002 265 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 OR7A5Q15622 319 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 SLC2A7Q6PXP3 512 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 KLHL17Q6TDP4 642 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 C17orf78Q8N4C9 275 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 OR52E4Q8NGH9 312 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 SLC7A10Q9NS82 523 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 UPB1Q9UBR1 384 aa17.48■□□□□ 0.39
CLN6-206ENST00000565471 NUDT7P0C024 238 aa17.47■□□□□ 0.39
CLN6-206ENST00000565471 PRG2P13727 222 aa17.47■□□□□ 0.39
CLN6-206ENST00000565471 NCF2P19878 526 aaPredicted RBP17.47■□□□□ 0.39
CLN6-206ENST00000565471 FOXG1P55316 489 aaPredicted RBP17.47■□□□□ 0.39
CLN6-206ENST00000565471 CLEC12BQ2HXU8 276 aa17.47■□□□□ 0.39
CLN6-206ENST00000565471 LRIF1Q5T3J3 769 aa17.47■□□□□ 0.39
CLN6-206ENST00000565471 TSPO2Q5TGU0 170 aa17.47■□□□□ 0.39
CLN6-206ENST00000565471 SERPINA11Q86U17 422 aa17.47■□□□□ 0.39
CLN6-206ENST00000565471 LSRQ86X29 649 aaPredicted RBP17.47■□□□□ 0.39
CLN6-206ENST00000565471 GOLGA6L1Q8N7Z2 621 aa17.47■□□□□ 0.39
CLN6-206ENST00000565471 TMEM99Q8N816 258 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms