RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TIMM23O14925 209 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 SLITRK5O94991 958 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 PRSS23O95084 383 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 NGFRP08138 427 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 VIMP08670 466 aaKnown RBP7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 IFI6P09912 130 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 LYNX1P0DP58 116 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 SAGP10523 405 aaPredicted RBP7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 BCKDHAP12694 445 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 DDCP20711 480 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 PRPS1L1P21108 318 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 GABRA3P34903 492 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 CLDN8P56748 225 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 RPL38P63173 70 aaKnown RBP7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 GUCY1A3Q02108 690 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 ADRM1Q16186 407 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 GSTA3Q16772 222 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 DPY19L1Q2PZI1 675 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 IL23RQ5VWK5 629 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 METTL21CQ5VZV1 264 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 ACSM5Q6NUN0 579 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 VHLLQ6RSH7 139 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 ZCCHC24Q8N2G6 241 aaKnown RBP7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 OR4M2Q8NGB6 313 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 OR4F15Q8NGB8 312 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 OR4C3Q8NH37 302 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 B4GALNT2Q8NHY0 566 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 FBXO27Q8NI29 283 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 ZFP90Q8TF47 636 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 UBE2FQ969M7 185 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 SLC25A28Q96A46 364 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 SH3YL1Q96HL8 342 aaPredicted RBP7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 ZNF300Q96RE9 604 aaPredicted RBP7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 BBS4Q96RK4 519 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 DOK1Q99704 481 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 REEP4Q9H6H4 257 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 SLC35C2Q9NQQ7 365 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 ATAD3AQ9NVI7 634 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 TMEM45AQ9NWC5 275 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 C19orf53Q9UNZ5 99 aaPredicted RBP7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 ARFGEF3Q5TH69 2177 aa7.84□□□□□ -1.15
VPS9D1-205ENST00000565452 A0A1B0GUS0 222 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 SH3PXD2BA1X283 911 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 hCG_2039718K7EN88 272 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 GPR171O14626 319 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 POLR3GO15318 223 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 MRPL33O75394 65 aaKnown RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 NUDT14O95848 222 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 IL3P08700 152 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 IDO1P14902 403 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 MRPL19P49406 292 aaKnown RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 CLNS1AP54105 237 aaKnown RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 IL1RL1Q01638 556 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 LRRC74AQ0VAA2 488 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 BAMBIQ13145 260 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 PDK3Q15120 406 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF311Q5JNZ3 666 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 KLHL24Q6TFL4 600 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 C17orf107Q6ZR85 190 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 C1QL4Q86Z23 238 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 SIGLECL1Q8N7X8 197 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 GATSQ8NAP1 163 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 GLB1L3Q8NCI6 653 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 C1orf162Q8NEQ5 155 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 C22orf15Q8WYQ4 148 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 EXOSC8Q96B26 276 aaKnown RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 LRRC58Q96CX6 371 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 ANKRD27Q96NW4 1050 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF317Q96PQ6 595 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 KATNB1Q9BVA0 655 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 RACGAP1Q9H0H5 632 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 NARFLQ9H6Q4 476 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 DYNLRB1Q9NP97 96 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 TCF7L2Q9NQB0 619 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 MIEF1Q9NQG6 463 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 G6PC2Q9NQR9 355 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 UBQLN4Q9NRR5 601 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 PDP1Q9P0J1 537 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 UPB1Q9UBR1 384 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 MARCOQ9UEW3 520 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 TESQ9UGI8 421 aaKnown RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 ATP6V1HQ9UI12 483 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 DCTN4Q9UJW0 460 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 TRIM33Q9UPN9 1127 aa7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 POLR3HQ9Y535 204 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 GPC6Q9Y625 555 aaPredicted RBP7.83□□□□□ -1.16
VPS9D1-205ENST00000565452 HEATR1Q9H583 2144 aaKnown RBP7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 IGKV3D-15A0A087WSY6 115 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 A0A1W2PNR3 127 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 SCDO00767 359 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 UBDO15205 165 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 PIN1P1O15428 100 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 OXSR1O95747 527 aaPredicted RBP7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 KNG1P01042 644 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 JUNP05412 331 aaKnown RBP7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 ADRA2AP08913 450 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 VSIG8P0DPA2 414 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 ADRA2CP18825 462 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 SDC1P18827 310 aa7.82□□□□□ -1.16
VPS9D1-205ENST00000565452 NPR2P20594 1047 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms