RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TNFRSF13CQ96RJ3 184 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 RHNO1Q9BSD3 238 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 INPP5KQ9BT40 448 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 C1QTNF6Q9BXI9 259 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 NUF2Q9BZD4 464 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 MTHFD2LQ9H903 347 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 MEAF6Q9HAF1 191 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 SSU72Q9NP77 194 aaKnown RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 PNPOQ9NVS9 261 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 SNUPNO95149 360 aaKnown RBP7.51□□□□□ -1.21
CAPN3-213ENST00000565173 PGRP06401 933 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 BGNP21810 368 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 TACR3P29371 465 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 MPGP29372 298 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 S100A3P33764 101 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 ACAA2P42765 397 aaKnown RBP7.51□□□□□ -1.21
CAPN3-213ENST00000565173 FABP6P51161 128 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 P2RY4P51582 365 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 POLR2HP52434 150 aaKnown RBP7.51□□□□□ -1.21
CAPN3-213ENST00000565173 MAP2K6P52564 334 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 NUDT6P53370 316 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 MVDP53602 400 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 CLNS1AP54105 237 aaKnown RBP7.51□□□□□ -1.21
CAPN3-213ENST00000565173 NME5P56597 212 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 VLDLRP98155 873 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 EPS8Q12929 822 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 RAB35Q15286 201 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 SWI5Q1ZZU3 235 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 DPY19L1Q2PZI1 675 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 MRPL2Q5T653 305 aaKnown RBP7.51□□□□□ -1.21
CAPN3-213ENST00000565173 C9orf135Q5VTT2 229 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF544Q6NX49 715 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 PODNL1Q6PEZ8 512 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 PAQR6Q6TCH4 344 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 CASP12Q6UXS9 341 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 PHC2Q8IXK0 858 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 FBXL14Q8N1E6 418 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 C1orf162Q8NEQ5 155 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-213ENST00000565173 C10orf105Q8TEF2 133 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 PMM1Q92871 262 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM45BQ96B21 275 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 DDIT4LQ96D03 193 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF385AQ96PM9 386 aaKnown RBP7.51□□□□□ -1.21
CAPN3-213ENST00000565173 SLC17A5Q9NRA2 495 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 SLC6A13Q9NSD5 602 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 RLIMQ9NVW2 624 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 PARPBPQ9NWS1 579 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 POU2F3Q9UKI9 436 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 SLC9A8Q9Y2E8 581 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 GPR45Q9Y5Y3 372 aa7.51□□□□□ -1.21
CAPN3-213ENST00000565173 CDHR4A6H8M9 788 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 CFAP73A6NFT4 308 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 LIPT2A6NK58 231 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 SDHDO14521 159 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 TM9SF1O15321 606 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 RGS16O15492 202 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-213ENST00000565173 LY6HO94772 140 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 AKR7A3O95154 331 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 F12P00748 615 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-213ENST00000565173 GSNP06396 782 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 GKN3PP0CG01 181 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 APOBEC3AP31941 199 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-213ENST00000565173 TXNL4AP83876 142 aaKnown RBP7.5□□□□□ -1.21
CAPN3-213ENST00000565173 BST1Q10588 318 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 STX3Q13277 289 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 CEACAM7Q14002 265 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 GSTA3Q16772 222 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 KRT71Q3SY84 523 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 CHRFAM7AQ494W8 412 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 BEND6Q5SZJ8 279 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-213ENST00000565173 CLEC2AQ6UVW9 174 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF621Q6ZSS3 439 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 C17orf78Q8N4C9 275 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM99Q8N816 258 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 OR9K2Q8NGE7 335 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 WDR60Q8WVS4 1066 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 ZBTB9Q96C00 473 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 OR52E6Q96RD3 313 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 PANX1Q96RD7 426 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 NAA11Q9BSU3 229 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-213ENST00000565173 SF3B5Q9BWJ5 86 aaKnown RBP7.5□□□□□ -1.21
CAPN3-213ENST00000565173 MANSC1Q9H8J5 431 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 AIG1Q9NVV5 245 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM160Q9NX00 188 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 UPB1Q9UBR1 384 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 AMDHD2Q9Y303 409 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 CHST2Q9Y4C5 530 aa7.5□□□□□ -1.21
CAPN3-213ENST00000565173 AQP7P3A6NL99 342 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 RNF212BA8MTL3 300 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 VWC2LB2RUY7 222 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 KLF11O14901 512 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 NPIPB7O75200 414 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 IFNA2P01563 188 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 GPIP06744 558 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 DBIP07108 87 aaKnown RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 FAM157CP0CG43 387 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 IGHV4-31P0DP07 118 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 NR2F1P10589 423 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms