RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 MXRA8Q9BRK3 442 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 NAA11Q9BSU3 229 aaPredicted RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 SUCNR1Q9BXA5 334 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 LGR4Q9BXB1 951 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 ANGPTL4Q9BY76 406 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 PARD6GQ9BYG4 376 aaPredicted RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 WDR11Q9BZH6 1224 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 ZNF430Q9H8G1 570 aaPredicted RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 IPPKQ9H8X2 491 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 APOBEC3GQ9HC16 384 aaKnown RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 RPS10P5Q9NQ39 176 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 PNO1Q9NRX1 252 aaKnown RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 ZNF701Q9NV72 531 aaPredicted RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 ASF1BQ9NVP2 202 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 TMEM161AQ9NX61 479 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 TAS2R8Q9NYW2 309 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 COMMD9Q9P000 198 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 SUSD2Q9UGT4 822 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 VAX2Q9UIW0 290 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 GPR34Q9UPC5 381 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 FNDC3AQ9Y2H6 1198 aaKnown RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 MRPS2Q9Y399 296 aaKnown RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 DNAJC15Q9Y5T4 150 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 CFAP20Q9Y6A4 193 aaKnown RBP5.84□□□□□ -1.47
PTPN9-204ENST00000564970 UBR2Q8IWV8 1755 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 A0A0C4DFX4 3053 aa5.84□□□□□ -1.47
PTPN9-204ENST00000564970 ABCA3Q99758 1704 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 A0A1W2PPE3 182 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZAR1LA6NP61 321 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SERPINE3A8MV23 424 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 MAGEB17A8MXT2 336 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 IDSB3KWA1 339 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 RNASEK-C17orf49H0YIS7 233 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 DLL1O00548 723 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 CXCL11O14625 94 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 FLRT2O43155 660 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ADAP1O75689 374 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 GRAP2O75791 330 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 OR2J2O76002 312 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 TOMM40O96008 361 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 IGF2P01344 180 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 F13BP05160 661 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 C8AP07357 584 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 IL3P08700 152 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 IL6RP08887 468 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 C1SP09871 688 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SFTA3P0C7M3 94 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SLC35G4P0C7Q5 338 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 GTF2F2P13984 249 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 PPIBP23284 216 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 PTPN6P29350 595 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 MIPP30301 263 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 HOXA13P31271 388 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SSTR4P31391 388 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 IGFALSP35858 605 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 GJA5P36382 358 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZFP36L2P47974 494 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 TTPAP49638 278 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 GTF2A2P52657 109 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 PTTG1IPP53801 180 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 TAS2R38P59533 333 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 CSNK1G2P78368 415 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 FABP5Q01469 135 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SSBP1Q04837 148 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 RAB40BQ12829 278 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 NOGQ13253 232 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 UBE2V1Q13404 147 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 MRPL49Q13405 166 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ENPP2Q13822 863 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 GTF2H3Q13889 308 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 CSHL1Q14406 222 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 UBE2V2Q15819 145 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 NKG7Q16617 165 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 GFOD2Q3B7J2 385 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ERFEQ4G0M1 354 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 CRTC2Q53ET0 693 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 NCMAPQ5T1S8 102 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 C22orf42Q6IC83 251 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 RPL22L1Q6P5R6 122 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF613Q6PF04 617 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 DPY19L2P2Q6ZN68 376 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 NUFIP2Q7Z417 695 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 FAM220AQ7Z4H9 259 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF546Q86UE3 836 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SIAH3Q8IW03 269 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 FBXO16Q8IX29 292 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 HS3ST5Q8IZT8 346 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 C1orf87Q8N0U7 546 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF664Q8N3J9 261 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 TTC9BQ8N6N2 239 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ARL14EPQ8N8R7 260 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 OR4K5Q8NGD3 323 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 OR13C2Q8NGS9 318 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 OR14K1Q8NGZ2 314 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 HAVCR2Q8TDQ0 301 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 THEM6Q8WUY1 208 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 FBXO32Q969P5 355 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 CTHRC1Q96CG8 243 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms