RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 RPS6KA3P51812 740 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 RAC1P63000 192 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 CSNK2A1P68400 391 aaPredicted RBP11.57□□□□□ -0.56
CLK3-214ENST00000564096 EGR4Q05215 589 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 IL18R1Q13478 541 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 SLC36A3Q495N2 470 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 WIPI1Q5MNZ9 446 aaPredicted RBP11.57□□□□□ -0.56
CLK3-214ENST00000564096 RPUSD3Q6P087 351 aaKnown RBP11.57□□□□□ -0.56
CLK3-214ENST00000564096 HIST3H2AQ7L7L0 130 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 OAFQ86UD1 273 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 P3H2Q8IVL5 708 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 DHRSXQ8N5I4 330 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 ATP6V1C2Q8NEY4 427 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 OR5M1Q8NGP8 315 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 OR13C2Q8NGS9 318 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 SMPDL3BQ92485 455 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 OSTF1Q92882 214 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 HIST1H2ACQ93077 130 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 PNPLA2Q96AD5 504 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 ZNF524Q96C55 264 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 ZHX1-C8orf76Q96EF9 292 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 KLHL15Q96M94 604 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 OR11A1Q9GZK7 315 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 LDAHQ9H6V9 325 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 EXO5Q9H790 373 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 TMEM185BQ9H7F4 350 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 ACKR4Q9NPB9 350 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 ALKBH4Q9NXW9 302 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 BCKDKO14874 412 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 MITFO75030 526 aaPredicted RBP11.56□□□□□ -0.56
CLK3-214ENST00000564096 SOX14O95416 240 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 ACTL6AO96019 429 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 FAM87AP0C7U9 286 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 SFTPCP11686 197 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 MAKP20794 623 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 POU1F1P28069 291 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 SFTPDP35247 375 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 PRPS1P60891 318 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 LSM11P83369 360 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLK3-214ENST00000564096 CACNA1BQ00975 2339 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 NPRL3Q12980 569 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 MYBPHQ13203 477 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 KEAP1Q14145 624 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 SLC10A1Q14973 349 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 ZIK1Q3SY52 487 aaPredicted RBP11.56□□□□□ -0.56
CLK3-214ENST00000564096 SLC6A19Q695T7 634 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 SMARCD3Q6STE5 483 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 FAM180AQ6UWF9 173 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 SLC46A3Q7Z3Q1 461 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 MEIOBQ8N635 442 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 RBMXL3Q8N7X1 1067 aaKnown RBP11.56□□□□□ -0.56
CLK3-214ENST00000564096 SCAIQ8N9R8 606 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 MFSD8Q8NHS3 518 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 LIPHQ8WWY8 451 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 KTI12Q96EK9 354 aaPredicted RBP11.56□□□□□ -0.56
CLK3-214ENST00000564096 OR5B2Q96R09 309 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 APOL4Q9BPW4 351 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 PTDSS2Q9BVG9 487 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 PRORYQ9H606 182 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 ZDHHC11Q9H8X9 412 aa11.56□□□□□ -0.56
CLK3-214ENST00000564096 TRGV5A0A0B4J1U4 118 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 ZC3H12DA2A288 527 aaKnown RBP11.55□□□□□ -0.56
CLK3-214ENST00000564096 CDC42EP2O14613 210 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 SEC14L5O43304 696 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 DNPH1O43598 174 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 NDUFB2O95178 105 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 OR6A2O95222 327 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 PMS2P2O95744 297 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 BGLAPP02818 100 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 FUT1P19526 365 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 IL11P20809 199 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 SLC6A6P31641 620 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 SMSP52788 366 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 CRISP1P54107 249 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 GFRA1P56159 465 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 B3GALT5-AS1P59052 145 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 CDC42P60953 191 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 RPS4XP62701 263 aaKnown RBP11.55□□□□□ -0.56
CLK3-214ENST00000564096 SLC35A1P78382 337 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 PMP22Q01453 160 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 OR7A5Q15622 319 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 SGCBQ16585 318 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
CLK3-214ENST00000564096 ZBED5Q49AG3 693 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 NHSL2Q5HYW2 709 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 SLC27A4Q6P1M0 643 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 ESPNLQ6ZVH7 1005 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 MEX3DQ86XN8 651 aaKnown RBP11.55□□□□□ -0.56
CLK3-214ENST00000564096 DEPDC4Q8N2C3 294 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 OR2T33Q8NG76 320 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 OR5J2Q8NH18 312 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 TAAR8Q969N4 342 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 MIB2Q96AX9 1013 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 SLC25A36Q96CQ1 311 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 ZNF570Q96NI8 536 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 CNTNAP3BQ96NU0 1288 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 UBL7Q96S82 380 aaPredicted RBP11.55□□□□□ -0.56
CLK3-214ENST00000564096 MBOAT4Q96T53 435 aa11.55□□□□□ -0.56
CLK3-214ENST00000564096 NPAS1Q99742 590 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms