RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TRAPPC6AO75865 159 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 TFAP2AP05549 437 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 ANXA8P13928 327 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 PRKACGP22612 351 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 RFC3P40938 356 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 MAGEA5P43359 124 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 UGT2B15P54855 530 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 NR1H2P55055 460 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 B3GALT5-AS1P59052 145 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 PPP2R2BQ00005 443 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 PRKCDQ05655 676 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 SELENBP1Q13228 472 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.66□□□□□ -0.54
SPG7-209ENST00000564047 OTUD3Q5T2D3 398 aaPredicted RBP11.66□□□□□ -0.54
SPG7-209ENST00000564047 RAET1LQ5VY80 246 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 C1orf94Q6P1W5 598 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 FAHD1Q6P587 224 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 POMZP3Q6PJE2 187 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 C5orf46Q6UWT4 87 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 NRMQ8IXM6 262 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 OR9Q2Q8NGE9 314 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 OR14L1PQ8NHC6 308 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 PIGXQ8TBF5 258 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 STK35Q8TDR2 534 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 RBM4BQ9BQ04 359 aaKnown RBP11.66□□□□□ -0.54
SPG7-209ENST00000564047 RBM4Q9BWF3 364 aaKnown RBP11.66□□□□□ -0.54
SPG7-209ENST00000564047 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 ACKR4Q9NPB9 350 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 SMPD3Q9NY59 655 aaPredicted RBP11.66□□□□□ -0.54
SPG7-209ENST00000564047 USE1Q9NZ43 259 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 CHRNA9Q9UGM1 479 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 MGAT4BQ9UQ53 548 aa11.66□□□□□ -0.54
SPG7-209ENST00000564047 RPH3AQ9Y2J0 694 aaPredicted RBP11.66□□□□□ -0.54
SPG7-209ENST00000564047 TMEM72A0PK05 275 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 OR2M5A3KFT3 312 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 TRIM64CA6NLI5 447 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 SHISA8B8ZZ34 492 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 EI24O14681 340 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 EFNA2O43921 213 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 NPIPB7O75200 414 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 ADAP00813 363 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 ZNF24P17028 368 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 CCNA2P20248 432 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 CBLP22681 906 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 TCEA1P23193 301 aaKnown RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 CAPGP40121 348 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 OMPP47874 163 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 CLK1P49759 484 aaKnown RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 ALDH3A2P51648 485 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 CTBP2P56545 445 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 LSM11P83369 360 aaKnown RBP eCLIP11.65□□□□□ -0.54
SPG7-209ENST00000564047 EGR4Q05215 589 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 DAG1Q14118 895 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 SLC10A1Q14973 349 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 PLEKHN1Q494U1 663 aaPredicted RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 C4orf17Q53FE4 359 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 WIPI1Q5MNZ9 446 aaPredicted RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 SLC6A19Q695T7 634 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 C3orf33Q6P1S2 294 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 PGBD2Q6P3X8 592 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 ZER1Q7Z7L7 766 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 YRDCQ86U90 279 aaKnown RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 CDK20Q8IZL9 346 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 DHRSXQ8N5I4 330 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 ATG16L2Q8NAA4 619 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 AQP11Q8NBQ7 271 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 OR5M1Q8NGP8 315 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 GNPDA2Q8TDQ7 276 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 SLC25A43Q8WUT9 341 aaPredicted RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 PNPLA2Q96AD5 504 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 FEVQ99581 238 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 DGCR6LQ9BY27 220 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 ZDHHC11Q9H8X9 412 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 MEPEQ9NQ76 525 aaPredicted RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 ZNF71Q9NQZ8 489 aaPredicted RBP11.65□□□□□ -0.54
SPG7-209ENST00000564047 TMEM5Q9Y2B1 443 aa11.65□□□□□ -0.54
SPG7-209ENST00000564047 TRIM64A6NGJ6 449 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 KPNA4O00629 521 aaPredicted RBP11.64□□□□□ -0.55
SPG7-209ENST00000564047 PIP5K1CO60331 668 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 GASTP01350 101 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 ALPLP05186 524 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 IFI30P13284 250 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 IL11P20809 199 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 CHMP24386 653 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 GFRA1P56159 465 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 RAC1P63000 192 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 FOXK1P85037 733 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 PMP22Q01453 160 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 TLE1Q04724 770 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 CRYZQ08257 329 aaKnown RBP11.64□□□□□ -0.55
SPG7-209ENST00000564047 CNPY1Q3B7I2 92 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 RNFT1Q5M7Z0 435 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 KDM4DQ6B0I6 523 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 TMPRSS11FQ6ZWK6 438 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 USP51Q70EK9 711 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 ALDH16A1Q8IZ83 802 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 TSPAN14Q8NG11 270 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 OR6S1Q8NH40 331 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 PFN4Q8NHR9 129 aa11.64□□□□□ -0.55
SPG7-209ENST00000564047 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms