RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ZBED5Q49AG3 693 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 SLX4IPQ5VYV7 408 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 LRRC69Q6ZNQ3 347 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 OAFQ86UD1 273 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 C8orf59Q8N0T1 100 aaPredicted RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 IQCF1Q8N6M8 205 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 FAM83FQ8NEG4 500 aaPredicted RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 OR51A7Q8NH64 312 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 FANK1Q8TC84 345 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 UBE2FQ969M7 185 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 ARL5BQ96KC2 179 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 SAMD8Q96LT4 415 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 TTTY12Q9BZ98 90 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 OR2B2Q9GZK3 357 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 SLC25A19Q9HC21 320 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 SERINC1Q9NRX5 453 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 IL20RAQ9UHF4 553 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 ZNF337Q9Y3M9 751 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 PCDHGA9Q9Y5G4 932 aaKnown RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 DNAJC13O75165 2243 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 OR2M5A3KFT3 312 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 H3BML4 177 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 GLSO94925 669 aaPredicted RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 ASAH2BP0C7U1 165 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 ZNF17P17021 662 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 GDF1P27539 372 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 SHC1P29353 583 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 GIPRP48546 466 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 MAP2K6P52564 334 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 TPD52P55327 224 aaPredicted RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 SELENBP1Q13228 472 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 RAET1LQ5VY80 246 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 C12orf73Q69YU5 71 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 ACSM5Q6NUN0 579 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 C3orf33Q6P1S2 294 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 UGT2A3Q6UWM9 527 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 C5orf46Q6UWT4 87 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 IGFL3Q6UXB1 125 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 THSD4Q6ZMP0 1018 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 YRDCQ86U90 279 aaKnown RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 C10orf53Q8N6V4 93 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 TMEM178AQ8NBL3 297 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 OR4Q3Q8NH05 313 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 TEX47Q8TBZ9 253 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 OSTF1Q92882 214 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 DDIT4LQ96D03 193 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 TSSK6Q9BXA6 273 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 CXorf56Q9H5V9 222 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 ZNF703Q9H7S9 590 aaPredicted RBP9.17□□□□□ -0.94
SMG1-208ENST00000563448 FKRPQ9H9S5 495 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 MCCC2Q9HCC0 563 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 NANSQ9NR45 359 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 TBC1D23Q9NUY8 699 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 MED19A0JLT2 244 aaPredicted RBP9.16□□□□□ -0.94
SMG1-208ENST00000563448 FAM166BA8MTA8 275 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 FTCDNL1E5RQL4 147 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 M0R129 80 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 HCN1O60741 890 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 TRAPPC6AO75865 159 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 RCBTB2O95199 551 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 OPN1LWP04000 364 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 PDGFAP04085 211 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 TSPAN19P0C672 248 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 IMPDH2P12268 514 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 PEPDP12955 493 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 RPS6KA3P51812 740 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 TMPRSS3P57727 454 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 RPS4XP62701 263 aaKnown RBP9.16□□□□□ -0.94
SMG1-208ENST00000563448 MYBPC1Q00872 1141 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 IL5RAQ01344 420 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 CD47Q08722 323 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 HYAL4Q2M3T9 481 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 CTU2Q2VPK5 515 aaKnown RBP9.16□□□□□ -0.94
SMG1-208ENST00000563448 GXYLT1Q4G148 440 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 SYT14P1Q58G82 188 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 WIPI1Q5MNZ9 446 aaPredicted RBP9.16□□□□□ -0.94
SMG1-208ENST00000563448 CLEC12AQ5QGZ9 265 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 FAM69AQ5T7M9 428 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 BORAQ6PGQ7 559 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 SMARCD3Q6STE5 483 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 THAP5Q7Z6K1 395 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 ENTHD1Q8IYW4 607 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 TMEM251Q8N6I4 163 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 ZFP62Q8NB50 900 aaPredicted RBP9.16□□□□□ -0.94
SMG1-208ENST00000563448 OR6S1Q8NH40 331 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 OR14L1PQ8NHC6 308 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 FAM81AQ8TBF8 368 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 FBLIM1Q8WUP2 373 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 SLC25A36Q96CQ1 311 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 APOL4Q9BPW4 351 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 PIGQQ9BRB3 760 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 POTEKPQ9BYX7 375 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 TMEM185BQ9H7F4 350 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 ZNF226Q9NYT6 803 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 AASSQ9UDR5 926 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 SEC14L4Q9UDX3 406 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 ZNF229Q9UJW7 825 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 RNF6Q9Y252 685 aa9.16□□□□□ -0.94
SMG1-208ENST00000563448 HSPE1-MOB4S4R3N1 261 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms