RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CA5AP35218 305 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 RPL22P35268 128 aaKnown RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 FDFT1P37268 417 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 MAGEA6P43360 314 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 GNPDA1P46926 289 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 DUSP3P51452 185 aaPredicted RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ARFIP1P53367 373 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 XIAPP98170 497 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ACVR1Q04771 509 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 CDH17Q12864 832 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 C1orf61Q13536 156 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 SNX1Q13596 522 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PEX6Q13608 980 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 SQLEQ14534 574 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TPSAB1Q15661 275 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PHKG1Q16816 387 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 DEFB133Q30KQ1 61 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 C14orf28Q4W4Y0 310 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TAF1BQ53T94 588 aaPredicted RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 FAM166AQ6J272 317 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TTC27Q6P3X3 843 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 GUSBP11Q6P575 273 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ZNF613Q6PF04 617 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ARSKQ6UWY0 536 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 WDR88Q6ZMY6 472 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PRUNE1Q86TP1 453 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 LINC00523Q86TU6 105 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 GTSCR1Q86UQ5 136 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 OR4K2Q8NGD2 314 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 OR6C4Q8NGE1 309 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 CCL4L1Q8NHW4 92 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 THRSPQ92748 146 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TAF15Q92804 592 aaKnown RBP eCLIP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PEX13Q92968 403 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 NAT6Q93015 286 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PGM2Q96G03 612 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 MS4A14Q96JA4 679 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 OR2M4Q96R27 311 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 RANBP9Q96S59 729 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 SPAG8Q99932 426 aaPredicted RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 RBM4BQ9BQ04 359 aaKnown RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 APOL2Q9BQE5 337 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TIMM29Q9BSF4 260 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 SPATA16Q9BXB7 569 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 GSDMCQ9BYG8 508 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 UBQLN3Q9H347 655 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 CHST11Q9NPF2 352 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 FAM212BQ9NTI7 297 aaPredicted RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 NLE1Q9NVX2 485 aaPredicted RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 SOHLH2Q9NX45 425 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ATXN10Q9UBB4 475 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ANGPTL2Q9UKU9 493 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 RUVBL2Q9Y230 463 aaKnown RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ARL5AQ9Y689 179 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 URB1O60287 2271 aaKnown RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 AHCTF1Q8WYP5 2266 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 SEC16AO15027 2179 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 IGLV3-16A0A075B6K0 115 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 A0A1B0GWJ7 208 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 NPIPA3F8WFD2 350 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 SLC28A1O00337 649 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 STX7O15400 261 aaKnown RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 NUDT21O43809 227 aaKnown RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 SCO2O43819 266 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 ATP6V1G1O75348 118 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 SRP72O76094 671 aaKnown RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 OR6A2O95222 327 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 SLC25A14O95258 325 aaPredicted RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 APRTP07741 180 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 F3P13726 295 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 PRG2P13727 222 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 AK4P27144 223 aaPredicted RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 COILP38432 576 aaPredicted RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 GRIA1P42261 906 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 OR3A1P47881 315 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 FNTAP49354 379 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 CNN1P51911 297 aaKnown RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 PAX9P55771 341 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 GNG11P61952 73 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 TRA2BP62995 288 aaKnown RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 CDK16Q00536 496 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 NFATC2Q13469 925 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 KCNJ11Q14654 390 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 POU6F1Q14863 301 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 CEBPEQ15744 281 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 CHRNA6Q15825 494 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 UGT3A2Q3SY77 523 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 GPR33Q49SQ1 333 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 XKR6Q5GH73 641 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 LDLRAP1Q5SW96 308 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 GPRC6AQ5T6X5 926 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 HES3Q5TGS1 186 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 CCDC137Q6PK04 289 aaKnown RBP4.13□□□□□ -1.75
LINC00254-201ENST00000563416 DOK6Q6PKX4 331 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 CD164L2Q6UWJ8 174 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 FAM151BQ6UXP7 276 aa4.13□□□□□ -1.75
LINC00254-201ENST00000563416 EFL1Q7Z2Z2 1120 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms