RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CXorf21Q9HAI6 301 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 MMP25Q9NPA2 562 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ADAP2Q9NPF8 381 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 AIG1Q9NVV5 245 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 MAT2BQ9NZL9 334 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 C19orf25Q9UFG5 118 aaPredicted RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 NDRG3Q9UGV2 375 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ATP6V1HQ9UI12 483 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 MRPS33Q9Y291 106 aaKnown RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 WBP11Q9Y2W2 641 aaKnown RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 USH1CQ9Y6N9 552 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 NSG1A0A0A6YYJ2 146 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 GNG14A0A1W2PPG7 69 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 ASPDHA6ND91 283 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 SYNDIG1LA6NDD5 238 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 A8MUA0 341 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 C17orf105B2RV13 164 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 TCP11X1B4DZS4 312 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 PEX12O00623 359 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 SCAMP2O15127 329 aaKnown RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 MYO1DO94832 1006 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 LRATO95237 230 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CRYAAP02489 173 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 C1QCP02747 245 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 IFI6P09912 130 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 LAMP1P11279 417 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 PORP16435 677 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 LBPP18428 481 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CSNK2A2P19784 350 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 GPX3P22352 226 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 TLX1P31314 330 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 PIGAP37287 484 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 FEN1P39748 380 aaKnown RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 EMDP50402 254 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 XKP51811 444 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 AQP5P55064 265 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CLDN8P56748 225 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 UFM1P61960 85 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 C2orf80Q0P641 193 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 STX4Q12846 297 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 SERTAD2Q14140 314 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 HEPACAMQ14CZ8 416 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 EBPQ15125 230 aaKnown RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 LTB4RQ15722 352 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 EXT1Q16394 746 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 ATP6AP1LQ52LC2 224 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 TRMT12Q53H54 448 aaKnown RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 SOWAHCQ53LP3 525 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 MFSD4BQ5TF39 518 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 ANKRD26P1Q6NSI1 321 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 IL20RBQ6UXL0 311 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 C16orf47Q6ZP98 133 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 CRLF3Q8IUI8 442 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 FUNDC1Q8IVP5 155 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 C9orf40Q8IXQ3 194 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 ARFGAP2Q8N6H7 521 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 FNDC5Q8NAU1 212 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 OR7G2Q8NG99 324 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 OR7A2PQ8NGA2 310 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 OR4K14Q8NGD5 310 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 OR9A2Q8NGT5 310 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 PSMA8Q8TAA3 256 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 METTL21AQ8WXB1 218 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 NCLNQ969V3 563 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CIDECQ96AQ7 238 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 EXOSC8Q96B26 276 aaKnown RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 KLHL29Q96CT2 875 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 MTERF3Q96E29 417 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 GIMAP5Q96F15 307 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 SENP5Q96HI0 755 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 FER1L6-AS2Q96M78 137 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 AMDHD1Q96NU7 426 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 LPAR4Q99677 370 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CCDC28BQ9BUN5 200 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 FAIM2Q9BWQ8 316 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 ADNPQ9H2P0 1102 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 GLIPR2Q9H4G4 154 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CLMPQ9H6B4 373 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 REEP4Q9H6H4 257 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 TRIM45Q9H8W5 580 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 ANKRA2Q9H9E1 313 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 SLC35C2Q9NQQ7 365 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 SDR39U1Q9NRG7 319 aaPredicted RBP4.12□□□□□ -1.75
SMG1-206ENST00000562668 VDAC3Q9Y277 283 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CSAG2Q9Y5P2 127 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 SPACA6W5XKT8 324 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CFAP46Q8IYW2 2715 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CHD6Q8TD26 2715 aa4.12□□□□□ -1.75
SMG1-206ENST00000562668 CROCCQ5TZA2 2017 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ZFYVE26Q68DK2 2539 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CBY3A6NI87 242 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 A6NL46 340 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 TRPC5OSA6NMA1 111 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 UPK1AO00322 258 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 P2RY10O00398 339 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PLOD2O00469 737 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PLOD3O60568 738 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 GUCY1B2O75343 617 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 NME6O75414 186 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms