RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TPM3P06753 285 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 ALOX5P09917 674 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 LTA4HP09960 611 aaKnown RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 LINGO3P0C6S8 592 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CECR9P0C854 216 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CTAGE8P0CG41 777 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 MLNP12872 115 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 HPGDP15428 266 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CALCRP30988 508 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 PIK3CGP48736 1102 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 PRIM2P49643 509 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 MRPS11P82912 194 aaKnown RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 HGFACQ04756 655 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 E2F2Q14209 437 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CRYMQ14894 314 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 TRIP13Q15645 432 aaPredicted RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 CCNG2Q16589 344 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 HIKESHIQ53FT3 197 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 KLF17Q5JT82 389 aaPredicted RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 CDKL4Q5MAI5 379 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 OTUD3Q5T2D3 398 aaPredicted RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 C1QTNF12Q5T7M4 302 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 SEL1L2Q5TEA6 688 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 ANKRD16Q6P6B7 361 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CASP12Q6UXS9 341 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CTAGE4Q8IX94 777 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 LRRC57Q8N9N7 239 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 B4GALNT2Q8NHY0 566 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 LINC01006Q8NI28 216 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 ANKRD49Q8WVL7 239 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 KTI12Q96EK9 354 aaPredicted RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 SLC47A1Q96FL8 570 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 ZNF681Q96N22 645 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 FAM210AQ96ND0 272 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 OR5B2Q96R09 309 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 SERPINI1Q99574 410 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 KLHDC3Q9BQ90 382 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 FAIM2Q9BWQ8 316 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CD244Q9BZW8 370 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 MARCH7Q9H992 704 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 XAB2Q9HCS7 855 aaKnown RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 AHSPQ9NZD4 102 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 OPTCQ9UBM4 332 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 SEC14L4Q9UDX3 406 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 CMAHPQ9Y471 501 aa4.51□□□□□ -1.69
HERC1-213ENST00000561359 SOX21Q9Y651 276 aaPredicted RBP4.51□□□□□ -1.69
HERC1-213ENST00000561359 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 IGKV3D-15A0A087WSY6 115 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 CCDC189A1A4V9 331 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GOLGA6L6A8MZA4 724 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 SRRM5B3KS81 715 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 K7EPI3 171 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 PDLIM1O00151 329 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GPR171O14626 319 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 XPNPEP2O43895 674 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 PLOD3O60568 738 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 MFAP3LO75121 409 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 COQ9O75208 318 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 ULK1O75385 1050 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 SKAP2O75563 359 aaPredicted RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 RP2O75695 350 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 NCR1O76036 304 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 ESRRBO95718 433 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 OXSR1O95747 527 aaPredicted RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 MYZAPP0CAP1 466 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 FAHP16930 419 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 PGAM1P18669 254 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 MPGP29372 298 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 CASQ1P31415 396 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GABRA3P34903 492 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GP5P40197 560 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 ALDH3B1P43353 468 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 KCNJ1P48048 391 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 SEC24CP53992 1094 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 PROK1P58294 105 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 UBE2NP61088 152 aaKnown RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 POU3F1Q03052 451 aaPredicted RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 SELENBP1Q13228 472 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 SNTB2Q13425 540 aaKnown RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 DAG1Q14118 895 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 NRN1LQ496H8 165 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GLE1Q53GS7 698 aaKnown RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 LIPJQ5W064 366 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 KRT80Q6KB66 452 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 CCDC91Q7Z6B0 441 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 GALNT7Q86SF2 657 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 ADGRG3Q86Y34 549 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 CNTN4Q8IWV2 1026 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 TEX9Q8N6V9 391 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 ZNF527Q8NB42 609 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 PDPRQ8NCN5 879 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 DEFB108BQ8NET1 73 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 OR7G2Q8NG99 324 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 OR4C3Q8NH37 302 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 ITFG2Q969R8 447 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 EXOSC8Q96B26 276 aaKnown RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 PHF21AQ96BD5 680 aa4.5□□□□□ -1.69
HERC1-213ENST00000561359 RBMXL1Q96E39 390 aaKnown RBP4.5□□□□□ -1.69
HERC1-213ENST00000561359 MARS2Q96GW9 593 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms