RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 RFTN2Q52LD8 501 aaPredicted RBP15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 PDLIM3Q53GG5 364 aaPredicted RBP15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 SPATA21Q7Z572 469 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 RIBC1Q8N443 379 aaPredicted RBP15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 TEX29Q8N6K0 151 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 OR5D16Q8NGK9 328 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 TMEM186Q96B77 213 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 OR11A1Q9GZK7 315 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 TNFRSF12AQ9NP84 129 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 ATAD3AQ9NVI7 634 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 MKS1Q9NXB0 559 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 TMEM114B3SHH9 223 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 SCAMP2O15127 329 aaKnown RBP15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 NPR2P20594 1047 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 SOAT1P35610 550 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 IL1RL1Q01638 556 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 NAAAQ02083 359 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 RIN1Q13671 783 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 TBRG1Q3YBR2 411 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 THSD4Q6ZMP0 1018 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 AAED1Q7RTV5 226 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 C10orf107Q8IVU9 208 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 ZCCHC24Q8N2G6 241 aaKnown RBP15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 SVOPLQ8N434 492 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 NATD1Q8N6N6 113 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 OR7A2PQ8NGA2 310 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 SFXN5Q8TD22 340 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 DDIT4LQ96D03 193 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 ANKRD27Q96NW4 1050 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 GATA5Q9BWX5 397 aaPredicted RBP15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 MOV10Q9HCE1 1003 aaKnown RBP15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 HIF1ANQ9NWT6 349 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 ATP6V1HQ9UI12 483 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 MKLN1Q9UL63 735 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 USP22Q9UPT9 525 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 SLC35A3Q9Y2D2 325 aa15.46■□□□□ 0.07
TSPAN3-208ENST00000560514 NPHS1O60500 1241 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 C6orf47O95873 294 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 LINC00032P0C843 101 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 BCKDHAP12694 445 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 MAPK1P28482 360 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 KHKP50053 298 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 HILS1P60008 231 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 H3F3AP84243 136 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 SLC17A1Q14916 467 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 PRR31Q5SQ13 230 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 ANKRD16Q6P6B7 361 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 USP43Q70EL4 1123 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 C16orf62Q7Z3J2 963 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 OR2T11Q8NH01 316 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 OR5AK3PQ8NH89 298 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 PMM1Q92871 262 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 TMEM45BQ96B21 275 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 AURKBQ96GD4 344 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 PRPF18Q99633 342 aaKnown RBP15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 ROPN1BQ9BZX4 212 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 ZNF442Q9H7R0 627 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 ROPN1Q9HAT0 212 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 LPAR2Q9HBW0 351 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 PCDHGB4Q9UN71 923 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 SPEF1Q9Y4P9 236 aa15.45■□□□□ 0.06
TSPAN3-208ENST00000560514 ZNF587BE7ETH6 402 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 FCMRO60667 390 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 UGT2B17O75795 530 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 CECR9P0C854 216 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 LAMP1P11279 417 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 EPHA1P21709 976 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 MATN1P21941 496 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 HTR3AP46098 478 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 C3orf36Q3SXR2 165 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 AWAT1Q58HT5 328 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 KANK2Q63ZY3 851 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 ADGRG3Q86Y34 549 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 NUP37Q8NFH4 326 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 OR1K1Q8NGR3 316 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 PSMA8Q8TAA3 256 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 EPS8L3Q8TE67 593 aaKnown RBP15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 BOD1Q96IK1 185 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 LRRC37BQ96QE4 947 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 DOK1Q99704 481 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 EXD2Q9NVH0 621 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 DNAJC15Q9Y5T4 150 aa15.44■□□□□ 0.06
TSPAN3-208ENST00000560514 TMED7-TICAM2A0A0A6YYA0 188 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 SMIM23A6NLE4 172 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 LSM1O15116 133 aaKnown RBP15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 LGI1O95970 557 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 MSMBP08118 114 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 NUDT17P0C025 328 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 THBS4P35443 961 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 PGM1P36871 562 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 SERPINB5P36952 375 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 GPR6P46095 362 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 RPS26P62854 115 aaKnown RBP15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 DEFA6Q01524 100 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 PCLAFQ15004 111 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 UGT3A2Q3SY77 523 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 OTUD3Q5T2D3 398 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 FAHD2BQ6P2I3 314 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 PAQR6Q6TCH4 344 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms