RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RPS4XP62701 263 aaKnown RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 FOXF1Q12946 379 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CDK5R2Q13319 367 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 INPP5JQ15735 1006 aaPredicted RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF74Q16587 644 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 DEFB109BQ30KR1 87 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 KCTD21Q4G0X4 260 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SLC25A30Q5SVS4 291 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 C1orf140Q5VVS0 124 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 MEDAGQ5VYS4 303 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SPINK14Q6IE38 97 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SLC25A25Q6KCM7 469 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 POMZP3Q6PJE2 187 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CCDC81Q6ZN84 652 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 Q6ZPB1 254 aaPredicted RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 PTCHD4Q6ZW05 846 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 HIST3H2AQ7L7L0 130 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 MAMDC2Q7Z304 686 aaPredicted RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SLC46A3Q7Z3Q1 461 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CCDC71Q8IV32 467 aaPredicted RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 P3H2Q8IVL5 708 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF786Q8N393 782 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 LNX2Q8N448 690 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 TMEM178AQ8NBL3 297 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 MDS2Q8NDY4 140 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 OR2M7Q8NG81 312 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 MFSD8Q8NHS3 518 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 POC1BQ8TC44 478 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 FANK1Q8TC84 345 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 HIST1H2ACQ93077 130 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 TAAR8Q969N4 342 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 FAM122AQ96E09 287 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 KTI12Q96EK9 354 aaPredicted RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SAMD8Q96LT4 415 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 C5orf34Q96MH7 638 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 GNRHR2Q96P88 292 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 PIGQQ9BRB3 760 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 TSSK6Q9BXA6 273 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 PLA2G12AQ9BZM1 189 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CCDC86Q9H6F5 360 aaKnown RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF696Q9H7X3 374 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 B4GALT7Q9UBV7 327 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SCOCQ9UIL1 159 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 DKKL1Q9UK85 242 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 RNF6Q9Y252 685 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 HIF3AQ9Y2N7 669 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 PCDHGB5Q9Y5G0 923 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 LOC400499M0QZD8 3231 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 PRRC2CQ9Y520 2896 aaKnown RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CACNA1AO00555 2505 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SVILO95425 2214 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 FRYQ5TBA9 3013 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TRAV27A0A087WT01 109 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TRIM64A6NGJ6 449 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SNTNA6NMZ2 147 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 BHLHE40O14503 412 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 RRP8O43159 456 aaKnown RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 IDH3BO43837 385 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 NME2P1O60361 137 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 ZIC3O60481 467 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 FZD7O75084 574 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 AHSA1O95433 338 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 IGFBP1P08833 259 aaPredicted RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 GABRB1P18505 474 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 CCNA2P20248 432 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 PTNP21246 168 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 NME2P22392 152 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 GRK5P34947 590 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 EIF2S3P41091 472 aaKnown RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 RPS5P46782 204 aaKnown RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 FXYD6P3P58550 94 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 GABARAPL2P60520 117 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 ARG2P78540 354 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 EFNB1P98172 346 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 FHL1Q13642 323 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SNAPC1Q16533 368 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SGCBQ16585 318 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 OCLNQ16625 522 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 HYAL4Q2M3T9 481 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TMEM44Q2T9K0 475 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 CTU2Q2VPK5 515 aaKnown RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 PGGHGQ32M88 737 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SYT14P1Q58G82 188 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TMEM236Q5W0B7 351 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 ACSM5Q6NUN0 579 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 DPY19L2P2Q6ZN68 376 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 MEX3DQ86XN8 651 aaKnown RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 FAM26EQ8N5C1 309 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 C10orf53Q8N6V4 93 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SCAIQ8N9R8 606 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 FDCSPQ8NFU4 85 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 OR8D4Q8NGM9 314 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 OR13C2Q8NGS9 318 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 OR51A7Q8NH64 312 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TM9SF4Q92544 642 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 SCMH1Q96GD3 660 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 PLEKHA8Q96JA3 519 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 JSRP1Q96MG2 331 aaPredicted RBP7.78□□□□□ -1.16
TRAF3-209ENST00000560463 MOGAT1Q96PD6 335 aa7.78□□□□□ -1.16
TRAF3-209ENST00000560463 TNFRSF13CQ96RJ3 184 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms