RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 INPP5KQ9BT40 448 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 TRAF4Q9BUZ4 470 aaPredicted RBP11.09□□□□□ -0.63
SNX1-209ENST00000559961 SF3B5Q9BWJ5 86 aaKnown RBP11.09□□□□□ -0.63
SNX1-209ENST00000559961 GRIP2Q9C0E4 1043 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 SLC38A1Q9H2H9 487 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 SLCO5A1Q9H2Y9 848 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 PIF1Q9H611 641 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 SELENONQ9NZV5 590 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 ZIM2Q9NZV7 527 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 DCTN4Q9UJW0 460 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 GPR45Q9Y5Y3 372 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 ATP23Q9Y6H3 246 aa11.09□□□□□ -0.63
SNX1-209ENST00000559961 ACANP16112 2415 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 TMEM72A0PK05 275 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 CLDN24A6NM45 220 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 ZNF716A6NP11 495 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 A8MVM7 634 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 VSTM5A8MXK1 200 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 AP3D1O14617 1153 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 ZNF500O60304 480 aaPredicted RBP11.08□□□□□ -0.64
SNX1-209ENST00000559961 RAMP1O60894 148 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 IFNA2P01563 188 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 BCHEP06276 602 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 CHRM4P08173 479 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 ALDOCP09972 364 aaKnown RBP11.08□□□□□ -0.64
SNX1-209ENST00000559961 CD40P25942 277 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 ACVR1BP36896 505 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 POLR2JP52435 117 aaKnown RBP11.08□□□□□ -0.64
SNX1-209ENST00000559961 SLC18A1P54219 525 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 MAGOHP61326 146 aaKnown RBP11.08□□□□□ -0.64
SNX1-209ENST00000559961 FUT5Q11128 374 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 CEACAM7Q14002 265 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 MPP2Q14168 576 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 OR7A5Q15622 319 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 MUC15Q8N387 334 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 IGFBPL1Q8WX77 278 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 TEX37Q96LM6 180 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 MUS81Q96NY9 551 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 TPT1P8Q9HAU6 139 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 CBLN4Q9NTU7 201 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 TMEM45AQ9NWC5 275 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 ADPRHL2Q9NX46 363 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 MALT1Q9UDY8 824 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 MAP1AP78559 2803 aaPredicted RBP11.08□□□□□ -0.64
SNX1-209ENST00000559961 PCNX3Q9H6A9 2034 aa11.08□□□□□ -0.64
SNX1-209ENST00000559961 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 ZNF587BE7ETH6 402 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 TLX2O43763 284 aaPredicted RBP11.07□□□□□ -0.64
SNX1-209ENST00000559961 SSX4O60224 188 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 SNNO75324 88 aaPredicted RBP11.07□□□□□ -0.64
SNX1-209ENST00000559961 AHSA1O95433 338 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 GKN3PP0CG01 181 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 ZCCHC18P0CG32 403 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 CDH2P19022 906 aaPredicted RBP11.07□□□□□ -0.64
SNX1-209ENST00000559961 MPGP29372 298 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 TTKP33981 857 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 CDKN2CP42773 168 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 UBE2NP61088 152 aaKnown RBP11.07□□□□□ -0.64
SNX1-209ENST00000559961 GABRA6Q16445 453 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 PGGHGQ32M88 737 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 TNFAIP8L3Q5GJ75 292 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 ZNF311Q5JNZ3 666 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 COX20Q5RI15 118 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 C9orf135Q5VTT2 229 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 ZNF544Q6NX49 715 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 DTX2Q86UW9 622 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 C1QTNF6Q9BXI9 259 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 CACNG6Q9BXT2 260 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 ADAM19Q9H013 955 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 MOV10Q9HCE1 1003 aaKnown RBP11.07□□□□□ -0.64
SNX1-209ENST00000559961 SLC13A4Q9UKG4 626 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 ZNF443Q9Y2A4 671 aaPredicted RBP11.07□□□□□ -0.64
SNX1-209ENST00000559961 FLVCR1Q9Y5Y0 555 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
SNX1-209ENST00000559961 ARID1AO14497 2285 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 DSCAMO60469 2012 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 NF1P21359 2839 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 A0A1W2PR80 420 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 PRAMEF27A3QJZ7 478 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 CDHR4A6H8M9 788 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 ELOA3DA6NLF2 546 aaPredicted RBP11.06□□□□□ -0.64
SNX1-209ENST00000559961 POLR3GO15318 223 aaPredicted RBP11.06□□□□□ -0.64
SNX1-209ENST00000559961 BCAS1O75363 584 aaPredicted RBP11.06□□□□□ -0.64
SNX1-209ENST00000559961 AKR7A3O95154 331 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 THBS1P07996 1170 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 ETFAP13804 333 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 RPS4Y1P22090 263 aaKnown RBP11.06□□□□□ -0.64
SNX1-209ENST00000559961 PPIBP23284 216 aaKnown RBP11.06□□□□□ -0.64
SNX1-209ENST00000559961 IL12AP29459 219 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 H3F3AP84243 136 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 IL1RL1Q01638 556 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 C1DQ13901 141 aaKnown RBP11.06□□□□□ -0.64
SNX1-209ENST00000559961 SLC17A1Q14916 467 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 ELOA3BQ3SY89 546 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 RNF220Q5VTB9 566 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 PRAMEF8Q5VWM4 474 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 PRAMEF7Q5VXH5 474 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 VRK2Q86Y07 508 aa11.06□□□□□ -0.64
SNX1-209ENST00000559961 KRT73Q86Y46 540 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms