RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ADGRG7Q96K78 797 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 OR5B2Q96R09 309 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 TACO1Q9BSH4 297 aaKnown RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 DPY30Q9C005 99 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 HOXD1Q9GZZ0 328 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 OR51I1Q9H343 314 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 SERHL2Q9H4I8 314 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 HHATLQ9HCP6 504 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 FANCFQ9NPI8 374 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 TIGARQ9NQ88 270 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 PAQR5Q9NXK6 330 aaPredicted RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 DTNAQ9Y4J8 743 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 CSMD2Q7Z408 3487 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 TACC2O95359 2948 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 PRR14LQ5THK1 2151 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 GOLGA8QA0A0J9YX86 632 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 CENPVL1A0A0U1RR11 272 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 GOLGA8OA6NCC3 632 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 GJE1A6NN92 205 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 GOLGA8NF8WBI6 632 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ADAMDEC1O15204 470 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ZNF264O43296 627 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 EFNA2O43921 213 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 FCMRO60667 390 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 STX11O75558 287 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 LYZL6O75951 148 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ADAP00813 363 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 IGHV3-9P01782 118 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 SERPINE1P05121 402 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 MYZAPP0CAP1 466 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 PABPC4LP0CB38 370 aaKnown RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 OR12D1P0DN82 309 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 PPP3CBP16298 524 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 BGNP21810 368 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ELK4P28324 431 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 LCN1P31025 176 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 SERPINB5P36952 375 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 PTH2RP49190 550 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 SUMO3P55854 103 aaPredicted RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 HPCAP84074 193 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 EMX2Q04743 252 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ZNF844Q08AG5 666 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 MERTKQ12866 999 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 FAPQ12884 760 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 SELENBP1Q13228 472 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 MAD2L1Q13257 205 aaPredicted RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 CBFBQ13951 182 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 MLC1Q15049 377 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 TIGD2Q4W5G0 525 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 GPAT3Q53EU6 434 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ZMAT1Q5H9K5 638 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 CEP85LQ5SZL2 805 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ATAD3BQ5T9A4 648 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 TFAP2EQ6VUC0 442 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 PLEKHM3Q6ZWE6 761 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 MTERF4Q7Z6M4 381 aaKnown RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 BIVMQ86UB2 503 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 UBE2J2Q8N2K1 259 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 OR5W2Q8NH69 310 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ZNF563Q8TA94 476 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 RAB3IL1Q8TBN0 382 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 MGARPQ8TDB4 240 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 GPR119Q8TDV5 335 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 RNF128Q8TEB7 428 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ZFP90Q8TF47 636 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 TMEM171Q8WVE6 324 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 AKAP1Q92667 903 aaKnown RBP eCLIP6.5□□□□□ -1.37
SPG11-213ENST00000558988 CPNE4Q96A23 557 aaPredicted RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 MOAP1Q96BY2 351 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ZNF524Q96C55 264 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 COQ8BQ96D53 544 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ZNF300Q96RE9 604 aaPredicted RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 SDF2Q99470 211 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 THUMPD3Q9BV44 507 aaKnown RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 NUF2Q9BZD4 464 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ROPN1BQ9BZX4 212 aaPredicted RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 COQ10BQ9H8M1 238 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ROPN1Q9HAT0 212 aaPredicted RBP6.5□□□□□ -1.37
SPG11-213ENST00000558988 PLSCR4Q9NRQ2 329 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 GLRX2Q9NS18 164 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 EXD2Q9NVH0 621 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 KLHL13Q9P2N7 655 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ICAM5Q9UMF0 924 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 NAV3Q8IVL0 2385 aa6.5□□□□□ -1.37
SPG11-213ENST00000558988 ROS1P08922 2347 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 SETD2Q9BYW2 2564 aaPredicted RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 CELSR1Q9NYQ6 3014 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 SERINC4A6NH21 518 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 SULT2B1O00204 365 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 TYROBPO43914 113 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 BCAS1O75363 584 aaPredicted RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 PRKD3O94806 890 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 H6PDO95479 791 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 LY6G6DO95868 133 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 FESP07332 822 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 KITP10721 976 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 PTNP21246 168 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 LOXP28300 417 aaPredicted RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 S100A3P33764 101 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms