RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 OR2AP1Q8NGE2 309 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 OR9K2Q8NGE7 335 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 SLC2A14Q8TDB8 520 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 OR1E3Q8WZA6 343 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 STMN2Q93045 179 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 TIMD4Q96H15 378 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 MAGEB18Q96M61 343 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 TCEANC2Q96MN5 208 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 MTMR9Q96QG7 549 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 GON7Q9BXV9 100 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 ROPN1BQ9BZX4 212 aaPredicted RBP3.26□□□□□ -1.89
CASC4-206ENST00000558847 NIPAL2Q9H841 368 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 FOLH1BQ9HBA9 442 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 PLGRKTQ9HBL7 147 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 SLC7A10Q9NS82 523 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 MARCH5Q9NX47 278 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 CD274Q9NZQ7 290 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 ZNF639Q9UID6 485 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 IKZF2Q9UKS7 526 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 CLEC4EQ9ULY5 219 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 UBQLN1Q9UMX0 589 aaKnown RBP3.26□□□□□ -1.89
CASC4-206ENST00000558847 PEX16Q9Y5Y5 336 aa3.26□□□□□ -1.89
CASC4-206ENST00000558847 KLF18A0A0U1RQI7 1052 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 EPOPA6NHQ4 379 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 VSTM2BA6NLU5 285 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 HAS3O00219 553 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 BBOX1O75936 387 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 P0C879 139 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 TROVE2P10155 538 aaKnown RBP eCLIP3.25□□□□□ -1.89
CASC4-206ENST00000558847 CMA1P23946 247 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 CD1CP29017 333 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 CRYBB2P43320 205 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 OR3A4PP47883 348 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 DIO3P55073 304 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 MRPL28Q13084 256 aaKnown RBP3.25□□□□□ -1.89
CASC4-206ENST00000558847 IDI1Q13907 227 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 PPP1R7Q15435 360 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 DMRTC1Q5HYR2 192 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 KLF17Q5JT82 389 aaPredicted RBP3.25□□□□□ -1.89
CASC4-206ENST00000558847 OR52E8Q6IFG1 317 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 UNQ9370/PRO34162Q6UXP9 181 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 LRRC74BQ6ZQY2 392 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 PGAP1Q75T13 922 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 TMEM179BQ7Z7N9 219 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 CDH26Q8IXH8 852 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 TMEM252Q8N6L7 170 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 BBS1Q8NFJ9 593 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 OR56B2PQ8NGI1 322 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 OR1L4Q8NGR5 311 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 UFD1Q92890 307 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 RASD2Q96D21 266 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 PAGE5Q96GU1 130 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 CNDP1Q96KN2 507 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 PGLYRP4Q96LB8 373 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 ZNF641Q96N77 438 aaPredicted RBP3.25□□□□□ -1.89
CASC4-206ENST00000558847 RNF2Q99496 336 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 MAPKAP1Q9BPZ7 522 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 KLHDC3Q9BQ90 382 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 EBF4Q9BQW3 602 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 CCDC77Q9BR77 488 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 CHRDL1Q9BU40 450 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 SUDS3Q9H7L9 328 aaPredicted RBP3.25□□□□□ -1.89
CASC4-206ENST00000558847 TM9SF3Q9HD45 589 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 SH2D2AQ9NP31 389 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 ETNK2Q9NVF9 386 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 SLC2A8Q9NY64 477 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 TMEM9Q9P0T7 183 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 SPATA7Q9P0W8 599 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 Q9UF83 564 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 MOKQ9UQ07 419 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 RALGAPA1Q6GYQ0 2036 aa3.25□□□□□ -1.89
CASC4-206ENST00000558847 FANCIQ9NVI1 1328 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 IGHV1OR21-1A0A087WYE8 117 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 TCRBV9S1A1TA0A576 114 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 ARHGEF35A5YM69 484 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 TUBAL3A6NHL2 446 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 LOC110117498-PIK3R3F6TDL0 507 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 DCTN6O00399 190 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 SRSF10O75494 262 aaKnown RBP3.24□□□□□ -1.89
CASC4-206ENST00000558847 OXSR1O95747 527 aaPredicted RBP3.24□□□□□ -1.89
CASC4-206ENST00000558847 KLK3P07288 261 aaPredicted RBP3.24□□□□□ -1.89
CASC4-206ENST00000558847 NCK1P16333 377 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 GABRR1P24046 479 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 SHMT2P34897 504 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 HSD17B2P37059 387 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 OPRD1P41143 372 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 KIR2DS4P43632 304 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 CDK16Q00536 496 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 PLD1Q13393 1074 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 VGLL4Q14135 290 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 GRB7Q14451 532 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 OXA1LQ15070 435 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 ZNF239Q16600 458 aaKnown RBP3.24□□□□□ -1.89
CASC4-206ENST00000558847 ENPP6Q6UWR7 440 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 ZYG11AQ6WRX3 759 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 DHDDSQ86SQ9 333 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 ALLCQ8N6M5 410 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 CATSPER1Q8NEC5 780 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 OR10H4Q8NGA5 316 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 AKR7LQ8NHP1 331 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms