RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TRAPPC4Q9Y296 219 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 CHST2Q9Y4C5 530 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 A0A096LPI6 279 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 DPRXA6NFQ7 191 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 OR5H1A6NKK0 313 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 EIF1BO60739 113 aaKnown RBP10.51□□□□□ -0.73
HERC1-202ENST00000558324 TGDSO95455 350 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 CNOT4O95628 575 aaKnown RBP10.51□□□□□ -0.73
HERC1-202ENST00000558324 HOXB9P17482 250 aaPredicted RBP10.51□□□□□ -0.73
HERC1-202ENST00000558324 SLC16A1P53985 500 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 FOXG1P55316 489 aaPredicted RBP10.51□□□□□ -0.73
HERC1-202ENST00000558324 ATP5J2P56134 94 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 RPS4XP62701 263 aaKnown RBP10.51□□□□□ -0.73
HERC1-202ENST00000558324 H3F3AP84243 136 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 AGKQ53H12 422 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 ZNF311Q5JNZ3 666 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 PAGE3Q5JUK9 113 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 TIMM23BQ5SRD1 257 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 GCNT6Q5T4J0 391 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 WBP2NLQ6ICG8 309 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 BLOC1S3Q6QNY0 202 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 CLEC9AQ6UXN8 241 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 GPAT4Q86UL3 456 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 MSRB3Q8IXL7 192 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 C10orf111Q8N326 155 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 TMEM99Q8N816 258 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 OR52E4Q8NGH9 312 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 NFKBIDQ8NI38 313 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 BBS10Q8TAM1 723 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 IGFBPL1Q8WX77 278 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 POM121Q96HA1 1249 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 USB1Q9BQ65 265 aaKnown RBP10.51□□□□□ -0.73
HERC1-202ENST00000558324 CCDC28BQ9BUN5 200 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 SPATA9Q9BWV2 254 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 ADAM19Q9H013 955 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 RAD21L1Q9H4I0 556 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 ARMC7Q9H6L4 198 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 A4GALTQ9NPC4 353 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 INTS9Q9NV88 658 aaKnown RBP10.51□□□□□ -0.73
HERC1-202ENST00000558324 UPB1Q9UBR1 384 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 SLC9A8Q9Y2E8 581 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 FLVCR1Q9Y5Y0 555 aa10.51□□□□□ -0.73
HERC1-202ENST00000558324 MTORP42345 2549 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 LIPT2A6NK58 231 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 ABCD4O14678 606 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 GPIP06744 558 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 SOD3P08294 240 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 HOXB4P17483 251 aaPredicted RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 CDKN1AP38936 164 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 MRPL19P49406 292 aaKnown RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 ZNF83P51522 516 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 MAP2K6P52564 334 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 LTBQ06643 244 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 FADDQ13158 208 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 SQLEQ14534 574 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 ZNF672Q499Z4 452 aaPredicted RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 TSPO2Q5TGU0 170 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 PAQR6Q6TCH4 344 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 PRSS57Q6UWY2 283 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 HDXQ7Z353 690 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 SMAP2Q8WU79 429 aaPredicted RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 GTPBP3Q969Y2 492 aaKnown RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 COX4I2Q96KJ9 171 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 TAPBPLQ9BX59 468 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 C1QTNF6Q9BXI9 259 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 SLC7A10Q9NS82 523 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 TAS2R16Q9NYV7 291 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 VAPAQ9P0L0 249 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 MALT1Q9UDY8 824 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 IFT52Q9Y366 437 aa10.5□□□□□ -0.73
HERC1-202ENST00000558324 MAGED1Q9Y5V3 778 aaPredicted RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 FLNAP21333 2647 aaKnown RBP10.5□□□□□ -0.73
HERC1-202ENST00000558324 FREM1Q5H8C1 2179 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 ZFHX3Q15911 3703 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 A0A1W2PP18 115 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 A8MVM7 634 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 HMGB1P1B2RPK0 211 aaPredicted RBP10.49□□□□□ -0.73
HERC1-202ENST00000558324 PGM3O95394 542 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 ITGA5P08648 1049 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 BMP2P12643 396 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 CDH2P19022 906 aaPredicted RBP10.49□□□□□ -0.73
HERC1-202ENST00000558324 PTNP21246 168 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 AQP1P29972 269 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 CDH11P55287 796 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 SPOCK1Q08629 439 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 SLC17A1Q14916 467 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 LRIF1Q5T3J3 769 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 C1orf140Q5VVS0 124 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 AAED1Q7RTV5 226 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 P2RY8Q86VZ1 359 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 OR9K2Q8NGE7 335 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 C3orf49Q96BT1 292 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 ZNF385AQ96PM9 386 aaKnown RBP10.49□□□□□ -0.73
HERC1-202ENST00000558324 BDH2Q9BUT1 245 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 TRIM2Q9C040 744 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 IKZF5Q9H5V7 419 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 BCL2L10Q9HD36 194 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 ZNF701Q9NV72 531 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms