RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 UBA52P62987 128 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 H3F3AP84243 136 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 SLC25A3Q00325 362 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 LCP2Q13094 533 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 LASP1Q14847 261 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 OCLNQ16625 522 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 NDUFAF6Q330K2 333 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 LSM12Q3MHD2 195 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 TBRG1Q3YBR2 411 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 HIKESHIQ53FT3 197 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ZNF311Q5JNZ3 666 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 DCST2Q5T1A1 773 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
SPG11-208ENST00000558155 FAM219BQ5XKK7 198 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ANKRD26P1Q6NSI1 321 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ACSM5Q6NUN0 579 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 EIF3MQ7L2H7 374 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 AAED1Q7RTV5 226 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 R3HCC1LQ7Z5L2 792 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 TREML1Q86YW5 311 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ZDHHC22Q8N966 263 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 OR56A1Q8NGH5 318 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 CLDND2Q8NHS1 167 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 FBXO25Q8TCJ0 367 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 DCAKDQ8WVC6 231 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 CKAP2Q8WWK9 683 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 RDH5Q92781 318 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 TMEM45BQ96B21 275 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ZNF524Q96C55 264 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 MTERF3Q96E29 417 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 FAM120BQ96EK7 910 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 OTUB1Q96FW1 271 aaPredicted RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 AURKBQ96GD4 344 aaPredicted RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 EGLN2Q96KS0 407 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ZNF317Q96PQ6 595 aaPredicted RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 TMEM237Q96Q45 408 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 SDF2Q99470 211 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ACTRT3Q9BYD9 372 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 NMUR2Q9GZQ4 415 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 RACGAP1Q9H0H5 632 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 RAB17Q9H0T7 212 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 PIF1Q9H611 641 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 YY1AP1Q9H869 796 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 UNKLQ9H9P5 680 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 TREM2Q9NZC2 230 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 CRNNQ9UBG3 495 aaPredicted RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 REV1Q9UBZ9 1251 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 CHRNA9Q9UGM1 479 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 CMAHPQ9Y471 501 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 FLVCR1Q9Y5Y0 555 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 PTGDR2Q9Y5Y4 395 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 WNK2Q9Y3S1 2297 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ARPC4-TTLL3A0A0A6YYG9 625 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 A0A0G2JMP0 313 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 A0A0X1KG70 313 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 TRIM49D1C9J1S8 452 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 NPIPB8E9PQR5 432 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 J3QLI3 93 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SLC28A1O00337 649 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 PPIHO43447 177 aaKnown RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 RAD51CO43502 376 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 STX11O75558 287 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SKAP2O75563 359 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 URI1O94763 535 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 AK1P00568 194 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SNRPAP09012 282 aaKnown RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 CECR9P0C854 216 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 UBTFL6P0CB48 400 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 ARAFP10398 606 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 CBR1P16152 277 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 CCNA2P20248 432 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 CALCRP30988 508 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 HTR3AP46098 478 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 ASMTP46597 345 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 MAP2K6P52564 334 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 IL13RA1P78552 427 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 MRPS11P82912 194 aaKnown RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 POU3F1Q03052 451 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 HGFACQ04756 655 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 DAG1Q14118 895 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SLC17A1Q14916 467 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 KIAA0040Q15053 153 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 GPR68Q15743 365 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 ZNF141Q15928 474 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 SPDYE7PQ495Y7 208 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 ZNF385BQ569K4 471 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 PDZK1Q5T2W1 519 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 HIST2H2BDQ6DRA6 164 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 TMEM225Q6GV28 225 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 PAQR6Q6TCH4 344 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 GRINAQ7Z429 371 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 C1QL2Q7Z5L3 287 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 LCA5Q86VQ0 697 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 ADGRG3Q86Y34 549 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 RIBC1Q8N443 379 aaPredicted RBP4.47□□□□□ -1.69
SPG11-208ENST00000558155 NATD1Q8N6N6 113 aa4.47□□□□□ -1.69
SPG11-208ENST00000558155 CCNYL1Q8N7R7 359 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms