RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 AGFG1P52594 562 aaKnown RBP22.83■■□□□ 1.25
SMAD6-202ENST00000557916 SLC35A1P78382 337 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 MS4A2Q01362 244 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 GTF2IRD2BQ6EKJ0 949 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 CYP2R1Q6VVX0 501 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 GDF7Q7Z4P5 450 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 GTF2IRD2Q86UP8 949 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 LIX1LQ8IVB5 337 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 MCEMP1Q8IX19 187 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 FAM86B1Q8N7N1 296 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 LILRB4Q8NHJ6 448 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 RNF128Q8TEB7 428 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 CCDC124Q96CT7 223 aaKnown RBP22.83■■□□□ 1.25
SMAD6-202ENST00000557916 ZHX1-C8orf76Q96EF9 292 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 V9GYQ6 96 aa22.83■■□□□ 1.25
SMAD6-202ENST00000557916 IGKV1D-42A0A075B6H8 117 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 LIPT2A6NK58 231 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 DVL2O14641 736 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 SMAD9O15198 467 aaKnown RBP22.82■■□□□ 1.24
SMAD6-202ENST00000557916 AHSA1O95433 338 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 PLGP00747 810 aaPredicted RBP22.82■■□□□ 1.24
SMAD6-202ENST00000557916 GPIP06744 558 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 CRHP06850 196 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 FPR1P21462 350 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 BMP5P22003 454 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 OPRM1P35372 400 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 C5orf46Q6UWT4 87 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 LINC00114Q6XXX2 140 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 DHFR2Q86XF0 187 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 P3H2Q8IVL5 708 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 SLC43A2Q8N370 569 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 KTI12Q96EK9 354 aaPredicted RBP22.82■■□□□ 1.24
SMAD6-202ENST00000557916 PYURFQ96I23 114 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 MPP4Q96JB8 637 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 SFXN3Q9BWM7 321 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 TAPBPLQ9BX59 468 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 RIMS3Q9UJD0 308 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 A0A1W2PNV4 684 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 IL18BPO95998 194 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 KLK2P20151 261 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 ATP6V1B2P21281 511 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 RPS5P46782 204 aaKnown RBP22.82■■□□□ 1.24
SMAD6-202ENST00000557916 YAP1P46937 504 aaKnown RBP22.82■■□□□ 1.24
SMAD6-202ENST00000557916 RNPS1Q15287 305 aaKnown RBP22.82■■□□□ 1.24
SMAD6-202ENST00000557916 OR7A5Q15622 319 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 ABHD3Q8WU67 409 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 ASB9Q96DX5 294 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 GMPPAQ96IJ6 420 aaPredicted RBP22.82■■□□□ 1.24
SMAD6-202ENST00000557916 PRRC1Q96M27 445 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 TMEM43Q9BTV4 400 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 GLRX2Q9NS18 164 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 CLEC4AQ9UMR7 237 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 A4GNTQ9UNA3 340 aa22.82■■□□□ 1.24
SMAD6-202ENST00000557916 COL12A1Q99715 3063 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 FAM90A27PA6NNH2 459 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 GSC2O15499 205 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 EIF1BO60739 113 aaKnown RBP22.81■■□□□ 1.24
SMAD6-202ENST00000557916 PTNP21246 168 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 IFNA8P32881 189 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 SIRPAP78324 504 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 MTX3Q5HYI7 312 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 PGM2L1Q6PCE3 622 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 WDR88Q6ZMY6 472 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 CNEP1R1Q8N9A8 125 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 EPYCQ99645 322 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 PTDSS2Q9BVG9 487 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 CADM1Q9BY67 442 aaKnown RBP22.81■■□□□ 1.24
SMAD6-202ENST00000557916 UCK2Q9BZX2 261 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 MED12LQ86YW9 2145 aa22.81■■□□□ 1.24
SMAD6-202ENST00000557916 TRAV36DV7A0A075B6V5 113 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 J3KTA2 159 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 OR2T1O43869 369 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 CYTIPO60759 359 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 TNFSF13O75888 250 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 THRBP10828 461 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 SLC25A35Q3KQZ1 300 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 EEF1A1P5Q5VTE0 462 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 LCN8Q6JVE9 175 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 TTC33Q6PID6 262 aaPredicted RBP22.8■■□□□ 1.24
SMAD6-202ENST00000557916 CCDC121Q6ZUS5 278 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 FAM214BQ7L5A3 538 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 MFSD8Q8NHS3 518 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 TAAR8Q969N4 342 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 SLC25A36Q96CQ1 311 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 PSMG3-AS1Q96PY0 264 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 PRSS27Q9BQR3 290 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 NAA11Q9BSU3 229 aaPredicted RBP22.8■■□□□ 1.24
SMAD6-202ENST00000557916 ENPP4Q9Y6X5 453 aa22.8■■□□□ 1.24
SMAD6-202ENST00000557916 SPTBN1Q01082 2364 aaKnown RBP22.79■■□□□ 1.24
SMAD6-202ENST00000557916 A1L4Q6 167 aa22.79■■□□□ 1.24
SMAD6-202ENST00000557916 EBAG9O00559 213 aa22.79■■□□□ 1.24
SMAD6-202ENST00000557916 SS18L1O75177 396 aaPredicted RBP22.79■■□□□ 1.24
SMAD6-202ENST00000557916 STAMBPO95630 424 aa22.79■■□□□ 1.24
SMAD6-202ENST00000557916 KIR2DL2P43627 348 aaPredicted RBP22.79■■□□□ 1.24
SMAD6-202ENST00000557916 H3F3AP84243 136 aa22.79■■□□□ 1.24
SMAD6-202ENST00000557916 RASGEF1BQ0VAM2 473 aa22.79■■□□□ 1.24
SMAD6-202ENST00000557916 ST3GAL3Q11203 375 aa22.79■■□□□ 1.24
SMAD6-202ENST00000557916 FOXD4Q12950 439 aaPredicted RBP22.79■■□□□ 1.24
SMAD6-202ENST00000557916 GUSBP1Q15486 140 aa22.79■■□□□ 1.24
SMAD6-202ENST00000557916 FAM69AQ5T7M9 428 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms