RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 OR51L1Q8NGJ5 315 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 OR4A15Q8NGL6 344 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 PDCD6IPQ8WUM4 868 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 PIH1D2Q8WWB5 315 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 NR4A3Q92570 626 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 NAT6Q93015 286 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 NABP1Q96AH0 204 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 ARL5BQ96KC2 179 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 TRNT1Q96Q11 434 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 TMEM165Q9HC07 324 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 ZC4H2Q9NQZ6 224 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 SPHK2Q9NRA0 654 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 NUDT4Q9NZJ9 180 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 WARS2Q9UGM6 360 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 MLXQ9UH92 298 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 GAB2Q9UQC2 676 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 C15orf41Q9Y2V0 281 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 KCNIP3Q9Y2W7 256 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 PCDHGB1Q9Y5G3 927 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 MMP24Q9Y5R2 645 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 AUP1Q9Y679 476 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 AK9Q5TCS8 1911 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 PLEKHH1Q9ULM0 1364 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CACNA1IQ9P0X4 2223 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 TRBV9A0A0B4J1U6 114 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 TRGV8A0A0C4DH27 118 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 IGHV3-38A0A0C4DH36 116 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 A0A1B0GUS0 222 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 B4DXG7 233 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 G3V2L1 256 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 BLOC1S5-TXNDC5H3BN57 136 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 GOSR2O14653 212 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 TFECO14948 347 aaPredicted RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 BUB3O43684 328 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 HCN1O60741 890 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 HSBP1O75506 76 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CCNB2O95067 398 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 C2P06681 752 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 TPM3P06753 285 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CD55P08174 381 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 ZNF853P0CG23 659 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 PVRP15151 417 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SELEP16581 610 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 IGFBP5P24593 272 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SPRP35270 261 aaPredicted RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 ACVR1BP36896 505 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CCNHP51946 323 aaPredicted RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 KPNA2P52292 529 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 ARHGDIAP52565 204 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 RIDAP52758 137 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 EFNA3P52797 238 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 TMEM50BP56557 158 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 ERVK-25P63136 954 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 OXA1LQ15070 435 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CNPY1Q3B7I2 92 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SLC22A6Q4U2R8 563 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 FAM120AOSQ5T036 256 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 ZNF772Q68DY9 489 aaPredicted RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 SPSB3Q6PJ21 355 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 PRSS57Q6UWY2 283 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SLC25A48Q6ZT89 311 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 PGAP1Q75T13 922 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 HDDC2Q7Z4H3 204 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SNX20Q7Z614 316 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 ERO1BQ86YB8 467 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 RBM45Q8IUH3 476 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 CD302Q8IX05 232 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 GPR65Q8IYL9 337 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 IQCKQ8N0W5 287 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CIARTQ8N365 385 aaPredicted RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 PRSS33Q8NF86 280 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 NUP37Q8NFH4 326 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 MRGPRDQ8TDS7 321 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CRYGNQ8WXF5 182 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 GTF3AQ92664 365 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 SEC22AQ96IW7 307 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CELF6Q96J87 481 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 C9orf85Q96MD7 179 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 CSPG4P5Q96PW8 444 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 KCNA7Q96RP8 456 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 ATP5SQ99766 215 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 MFFQ9GZY8 342 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 OR2AG1Q9H205 316 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 PARVGQ9HBI0 331 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 DMAP1Q9NPF5 467 aaPredicted RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 SAMSN1Q9NSI8 373 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 UXTQ9UBK9 157 aaPredicted RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 CTSFQ9UBX1 484 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SLC2A6Q9UGQ3 507 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SAMD4AQ9UPU9 718 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 ERVW-1Q9UQF0 538 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 RPL36Q9Y3U8 105 aaKnown RBP3.14□□□□□ -1.91
TDP1-217ENST00000557782 CPQQ9Y646 472 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 SAR1BQ9Y6B6 198 aa3.14□□□□□ -1.91
TDP1-217ENST00000557782 TRAV6A0A075B6T7 132 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 IGHV3OR16-12A0A075B7B8 117 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 RAB19A4D1S5 217 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 VSTM2BA6NLU5 285 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SULT2B1O00204 365 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms