RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SLC7A7Q9UM01 511 aa12.67□□□□□ -0.38
SUPT16H-208ENST00000557652 MEMO1Q9Y316 297 aa12.67□□□□□ -0.38
SUPT16H-208ENST00000557652 CACNA1CQ13936 2221 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 SLC22A20A6NK97 555 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 CLCA1A8K7I4 914 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 TNFSF11O14788 317 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 SEMA7AO75326 666 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 LYPD3O95274 346 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 FCGR1AP12314 374 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 PLA2G2AP14555 144 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 NQO1P15559 274 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 IL11P20809 199 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 AGAP20933 346 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 GNLYP22749 145 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 HMGA2P52926 109 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ACTR3P61158 418 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 SRYQ05066 204 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 PDK3Q15120 406 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 IGFBP7Q16270 282 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ZNF239Q16600 458 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ZFP1Q6P2D0 407 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 POMZP3Q6PJE2 187 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 PAQR6Q6TCH4 344 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 RPTNQ6XPR3 784 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ADGRG5Q8IZF4 528 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 SCAIQ8N9R8 606 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ADPRHL1Q8NDY3 354 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 OR5M9Q8NGP3 310 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ACOT11Q8WXI4 607 aaPredicted RBP12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 UTP4Q969X6 686 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 RSRC1Q96IZ7 334 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 DMRTA2Q96SC8 542 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 SEPHS2Q99611 448 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 PRSS27Q9BQR3 290 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 TMEM185BQ9H7F4 350 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 RNF122Q9H9V4 155 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 ALKBH4Q9NXW9 302 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 SLC5A6Q9Y289 635 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 MED31Q9Y3C7 131 aa12.66□□□□□ -0.38
SUPT16H-208ENST00000557652 LIPT2A6NK58 231 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 HSPB2A8KAH6 182 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 FFAR1O14842 300 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 RCBTB2O95199 551 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 IL18BPO95998 194 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 IL2RAP01589 272 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 MT-ND1P03886 318 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 ENPP1P22413 925 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 GTF2E2P29084 291 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 NUP107P57740 925 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 H3F3AP84243 136 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 EGR4Q05215 589 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 HSPB2Q16082 182 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 RRM2BQ7LG56 351 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 TSEN54Q7Z6J9 526 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 CDK20Q8IZL9 346 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 PIGXQ8TBF5 258 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 RNF217Q8TC41 542 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 CANT1Q8WVQ1 401 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 TMEM239Q8WW34 195 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 ARL5BQ96KC2 179 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 TTYH2Q9BSA4 534 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 PRR14Q9BWN1 585 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 FKRPQ9H9S5 495 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 ARMC1Q9NVT9 282 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 TINAGQ9UJW2 476 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 B3GALT5Q9Y2C3 310 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 FAM215AQ9Y5M1 114 aa12.65□□□□□ -0.38
SUPT16H-208ENST00000557652 IGKV1D-42A0A075B6H8 117 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 FTCDNL1E5RQL4 147 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 hCG_2039718K7EN88 272 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 CCL21O00585 134 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 CXCL13O43927 109 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 GADD45GO95257 159 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 WISP1O95388 367 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 THY1P04216 161 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 SHC1P29353 583 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 CEACAM8P31997 349 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 IFNGR2P38484 337 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 SMSP52788 366 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 CTBP2P56545 445 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 PON3Q15166 354 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 C1QL3Q5VWW1 255 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 RTL6Q6ICC9 239 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 OR2T5Q6IEZ7 315 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 FCRLAQ7L513 359 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 MAMDC2Q7Z304 686 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 P4HA3Q7Z4N8 544 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 TSPYL5Q86VY4 417 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 OR2T29Q8NH02 315 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 PRR7Q8TB68 274 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 RNF128Q8TEB7 428 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 ASB5Q8WWX0 329 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms