RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 CHMP2AO43633 222 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 NIPSNAP2O75323 286 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SCRG1O75711 98 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CRTAPO75718 401 aaPredicted RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 GNA14O95837 355 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 P04436 131 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 MELTFP08582 738 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CT45A10P0DMU9 189 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 PRKACAP17612 351 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CPN2P22792 545 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 YWHABP31946 246 aaKnown RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 HTR2BP41595 481 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CRYBB2P43320 205 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 XCR1P46094 333 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SLC11A1P49279 550 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ACLYP53396 1101 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 C21orf59P57076 290 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ERVK11-1P61568 191 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 MERTKQ12866 999 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 KCNJ11Q14654 390 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CHRNA6Q15825 494 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 AANATQ16613 207 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 MICAQ29983 383 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 NKAIN1Q4KMZ8 207 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SBK1Q52WX2 424 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 C2CD6Q53TS8 623 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ZNF506Q5JVG8 444 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 LEMD1Q68G75 181 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 C18orf65Q6ZTR6 163 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 USP43Q70EL4 1123 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 LUZP2Q86TE4 346 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ERI1Q8IV48 349 aaKnown RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 NKAIN4Q8IVV8 208 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 KATNAL2Q8IYT4 538 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SLC22A18ASQ8N1D0 253 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 COMMD1Q8N668 190 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CSGALNACT2Q8N6G5 542 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CSNK1A1LQ8N752 337 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 C4orf32Q8N8J7 132 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 DNAAF3Q8N9W5 541 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 OR52H1Q8NGJ2 320 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ELMO1Q92556 727 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 GTF3AQ92664 365 aaKnown RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 TOMM40LQ969M1 308 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 PSMG2Q969U7 264 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CXorf40BQ96DE9 158 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 PLEKHA8Q96JA3 519 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 MS4A14Q96JA4 679 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ZNF641Q96N77 438 aaPredicted RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 TBX15Q96SF7 602 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 MAPKAP1Q9BPZ7 522 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ZNF670Q9BS34 389 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 RAB34Q9BZG1 259 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 NAT10Q9H0A0 1025 aaKnown RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 OPN3Q9H1Y3 402 aaPredicted RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 PPA2Q9H2U2 334 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 VCX3BQ9H321 246 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 TUBB1Q9H4B7 451 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 TDRD3Q9H7E2 651 aaKnown RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 NHEJ1Q9H9Q4 299 aaPredicted RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SPACA1Q9HBV2 294 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 NANSQ9NR45 359 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CHRAC1Q9NRG0 131 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 NUDT15Q9NV35 164 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ARMCX1Q9P291 453 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CTSZQ9UBR2 303 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 WARS2Q9UGM6 360 aaKnown RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 ASIC3Q9UHC3 531 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 MUTYHQ9UIF7 546 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 PHF11Q9UIL8 331 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 RIMS3Q9UJD0 308 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 PITPNC1Q9UKF7 332 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 VANGL2Q9ULK5 521 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SAMD4AQ9UPU9 718 aaKnown RBP2.51□□□□□ -2.01
TRAV28-201ENST00000557548 STARD10Q9Y365 291 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 TRAV6A0A075B6T7 132 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 LOC100131303A0A0U1RQF7 123 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 IQANK1A0A1B0GTG1 560 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 TCRBV9S1A1TA0A576 114 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 SMCO3A2RU48 225 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 PRR23AA6NEV1 266 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 EFCAB7A8K855 629 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 A8MXQ7 604 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 IDSB3KWA1 339 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 SULT2B1O00204 365 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 SAP18O00422 153 aaKnown RBP2.5□□□□□ -2.01
TRAV28-201ENST00000557548 DLGAP1O14490 977 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 AKR7A2O43488 359 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 EDIL3O43854 480 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 GPX5O75715 221 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 NOL4O94818 638 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 H6PDO95479 791 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 SLC2A10O95528 541 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 TMEM50AO95807 157 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 APOA1P02647 267 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 MMP1P03956 469 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 LGALS2P05162 132 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 SERPIND1P05546 499 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 TRIM49P0CI25 452 aa2.5□□□□□ -2.01
TRAV28-201ENST00000557548 TRIM49CP0CI26 452 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms