RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ZGRF1Q86YA3 2104 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 AKAP6Q13023 2319 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 NPIPA5A0A0B4J1W7 369 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 EFCAB7A8K855 629 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 NPIPA5E9PKD4 350 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 BTN3A3O00478 584 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 B3GAT3O94766 335 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 BMP15O95972 392 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 OPN1LWP04000 364 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 IGF1P05019 195 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 IGKV2-30P06310 120 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 T-ENOLP0DO92 83 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 SLC2A3P11169 496 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 NCK1P16333 377 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 EDNRAP25101 427 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 UCP1P25874 307 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 FCGR2CP31995 323 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 SAA4P35542 130 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 LINC01547P58512 204 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 IL9RQ01113 521 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 TLE4Q04727 773 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 RBBP5Q15291 538 aaKnown RBP4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 KRTAP24-1Q3LI83 254 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 VWA2Q5GFL6 755 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 PPM1LQ5SGD2 360 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 ARMC12Q5T9G4 340 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 PRAMEF5Q5TYX0 476 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 PRAMEF6Q5VXH4 476 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 SCYL2Q6P3W7 929 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 DOK6Q6PKX4 331 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 C16orf47Q6ZP98 133 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 NCCRP1Q6ZVX7 275 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 ANKRD37Q7Z713 158 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 OR9K2Q8NGE7 335 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 PPTC7Q8NI37 304 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 CNIH3Q8TBE1 160 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 RPRD1AQ96P16 312 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 C19orf24Q9BVV8 132 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 ROPN1BQ9BZX4 212 aaPredicted RBP4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 COMMD4Q9H0A8 199 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 NT5DC2Q9H857 520 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 SLC38A10Q9HBR0 1119 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 IL1RAPQ9NPH3 570 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 SUN2Q9UH99 717 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 PIGLQ9Y2B2 252 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
MTHFD1-216ENST00000557539 DLG5Q8TDM6 1919 aa4.09□□□□□ -1.76
MTHFD1-216ENST00000557539 SHANK1Q9Y566 2161 aa4.09□□□□□ -1.76
MTHFD1-216ENST00000557539 A0A087WW49 117 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 FBP2O00757 339 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 ZG16O60844 167 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CRLF1O75462 422 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CEACAM4O75871 244 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SCGNO76038 276 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 PDE5AO76074 875 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 PRSS56P0CW18 603 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 XRCC1P18887 633 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 MX1P20591 662 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CALML3P27482 149 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 OPRL1P41146 370 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 MAGEA8P43361 318 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CRYBA2P53672 197 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 FOXG1P55316 489 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SEC61GP60059 68 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 HAND2P61296 217 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 GSTO1P78417 241 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 COX10Q12887 443 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 EIF2B1Q14232 305 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 TMEM187Q14656 261 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 ATXN7L3Q14CW9 347 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SSX2Q16385 188 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 KNOP1Q1ED39 458 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 C1orf185Q5T7R7 199 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF324BQ6AW86 544 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 TTC41PQ6P2S7 1318 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 FIP1L1Q6UN15 594 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 Q6ZSR9 355 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CYS1Q717R9 158 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CCDC80Q76M96 950 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 RUFY3Q7L099 469 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 TRPM8Q7Z2W7 1104 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 KCNMB4Q86W47 210 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 RFLNBQ8N5W9 214 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CLDN19Q8N6F1 224 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 BBOF1Q8ND07 529 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 OR4D5Q8NGN0 318 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SLC2A14Q8TDB8 520 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 DNAJB3Q8WWF6 145 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SMARCD2Q92925 531 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SLCO2A1Q92959 643 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 BIRC7Q96CA5 298 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CNRIP1Q96F85 164 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 PELI1Q96FA3 418 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 PLEKHF1Q96S99 279 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 DGCR6LQ9BY27 220 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 HIPK2Q9H2X6 1198 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 WDR41Q9HAD4 459 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 CRLF2Q9HC73 371 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SMOXQ9NWM0 555 aa4.08□□□□□ -1.76
MTHFD1-216ENST00000557539 SPATA7Q9P0W8 599 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms