RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ETFAP13804 333 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 PTAFRP25105 342 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 NTF4P34130 210 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 CRATP43155 626 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 MVDP53602 400 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 DSTNP60981 165 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 MAGOHP61326 146 aaKnown RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 SLC9B1Q4ZJI4 515 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 OTUD3Q5T2D3 398 aaPredicted RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 RNF220Q5VTB9 566 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 ZNF836Q6ZNA1 936 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 VRK2Q86Y07 508 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 C1orf162Q8NEQ5 155 aaPredicted RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 ITCHQ96J02 903 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 HS6ST2Q96MM7 605 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 SLCO5A1Q9H2Y9 848 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 MANSC1Q9H8J5 431 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 TPT1P8Q9HAU6 139 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 SDR39U1Q9NRG7 319 aaPredicted RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 RLIMQ9NVW2 624 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 PARPBPQ9NWS1 579 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 UPB1Q9UBR1 384 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 PRDM4Q9UKN5 801 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 ZNF443Q9Y2A4 671 aaPredicted RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 SLC25A15Q9Y619 301 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 SONP18583 2426 aaKnown RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 ABCA1O95477 2261 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 TMEM247A6NEH6 219 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 RNF223E7ERA6 249 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 GPIP06744 558 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 THBS1P07996 1170 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 CXCR1P25024 350 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 ACVR1BP36896 505 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 ZNF83P51522 516 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 COPZ1P61923 177 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 SLC17A1Q14916 467 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 LARS2Q15031 903 aaKnown RBP12.46□□□□□ -0.41
SNX6-210ENST00000557341 MAPK11Q15759 364 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 GABRA6Q16445 453 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 NRF1Q16656 503 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 ZSWIM7Q19AV6 140 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 C6orf10Q5SRN2 563 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 AGAP6Q5VW22 663 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 SLC22A25Q6T423 547 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 MAVSQ7Z434 540 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 CADM2Q8N3J6 435 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 OR52E4Q8NGH9 312 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 AMBRA1Q9C0C7 1298 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 ADAM19Q9H013 955 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 THUMPD1Q9NXG2 353 aaKnown RBP12.46□□□□□ -0.41
SNX6-210ENST00000557341 DCTN4Q9UJW0 460 aa12.46□□□□□ -0.41
SNX6-210ENST00000557341 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.42
SNX6-210ENST00000557341 A0A1W2PR80 420 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 LIPT2A6NK58 231 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 M0R1B8 84 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 PDLIM1O00151 329 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 KLF11O14901 512 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 UBDO15205 165 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 ERLIN1O75477 346 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 CD8AP01732 235 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 TFPTP0C1Z6 253 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 GKN3PP0CG01 181 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 CD40P25942 277 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 POLR2JP52435 117 aaKnown RBP12.45□□□□□ -0.42
SNX6-210ENST00000557341 FOXG1P55316 489 aaPredicted RBP12.45□□□□□ -0.42
SNX6-210ENST00000557341 TGFBR3Q03167 851 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 DMTNQ08495 405 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 SPOCK1Q08629 439 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 CEACAM7Q14002 265 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 OR7A5Q15622 319 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 GTDC1Q4AE62 458 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 RPS26P11Q5JNZ5 115 aaPredicted RBP12.45□□□□□ -0.42
SNX6-210ENST00000557341 C9orf135Q5VTT2 229 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 WBP2NLQ6ICG8 309 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 LSRQ86X29 649 aaPredicted RBP12.45□□□□□ -0.42
SNX6-210ENST00000557341 DEPDC4Q8N2C3 294 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 MIER2Q8N344 545 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 OR9K2Q8NGE7 335 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 OR9I1Q8NGQ6 314 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 SLC38A5Q8WUX1 472 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 TMEM45BQ96B21 275 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 TLCD1Q96CP7 247 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 AURKBQ96GD4 344 aaPredicted RBP12.45□□□□□ -0.42
SNX6-210ENST00000557341 TMEM19Q96HH6 336 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 MUS81Q96NY9 551 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 OR52B2Q96RD2 323 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
SNX6-210ENST00000557341 ARMC7Q9H6L4 198 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 AMDHD2Q9Y303 409 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 DNHD1Q96M86 4753 aa12.45□□□□□ -0.42
SNX6-210ENST00000557341 A0A096LPI6 279 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 AQP7P3A6NL99 342 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 A8MVM7 634 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 FRS3O43559 492 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 NDUFS7O75251 213 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms