RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 A0A0G2JMP0 313 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 A0A0X1KG70 313 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 A0A1W2PRB8 838 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 C1orf226A1L170 272 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 WDR91A4D1P6 747 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GJE1A6NN92 205 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 EFNA2O43921 213 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 CCNT2O60583 730 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 UGDHO60701 494 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 CYTIPO60759 359 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 ERAL1O75616 437 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 SEMA3DO95025 777 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 ANGPTL1O95841 491 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GBAP04062 536 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 OR4A8P0C604 315 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 EDNRAP25101 427 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GP5P40197 560 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GPX6P59796 221 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PRPS1P60891 318 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PHEXP78562 749 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PSG6Q00889 435 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 MALLQ13021 153 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 STX5Q13190 355 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 DDX39BQ13838 428 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PDK3Q15120 406 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GABRA6Q16445 453 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 DECR1Q16698 335 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PLPPR5Q32ZL2 321 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 TMEM176BQ3YBM2 270 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 ZNF628Q5EBL2 1059 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 FBXO48Q5FWF7 155 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 KPRPQ5T749 579 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 SAXO2Q658L1 398 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 ASPHD2Q6ICH7 369 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 C16orf87Q6PH81 154 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 APOOLQ6UXV4 268 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 NPSR1Q6W5P4 371 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PAGE2Q7Z2X7 111 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 NUDT13Q86X67 352 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 VSTM4Q8IW00 320 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 SAMD14Q8IZD0 417 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 ZCCHC24Q8N2G6 241 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 TXLNBQ8N3L3 684 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 C17orf78Q8N4C9 275 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 RNF175Q8N4F7 328 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PDPRQ8NCN5 879 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 OR4M2Q8NGB6 313 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 POC1BQ8TC44 478 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GTF3AQ92664 365 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 SLC25A28Q96A46 364 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 TMIGD2Q96BF3 282 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 CNRIP1Q96F85 164 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 C1orf147Q96MC9 270 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 NAP1L3Q99457 506 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 SERPINI1Q99574 410 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 NPAS1Q99742 590 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 RBM4BQ9BQ04 359 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PSD2Q9BQI7 771 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 NAT9Q9BTE0 207 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 C1QTNF5Q9BXJ0 243 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 SRXN1Q9BYN0 137 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 TBL1XR1Q9BZK7 514 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GSTO2Q9H4Y5 243 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 CXorf36Q9H7Y0 433 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 CA10Q9NS85 328 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 MED17Q9NVC6 651 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 TAS2R16Q9NYV7 291 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 TAS2R9Q9NYW1 312 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 TREM2Q9NZC2 230 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 AHSPQ9NZD4 102 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 FLRT3Q9NZU0 649 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 KLHL21Q9UJP4 597 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 MRTO4Q9UKD2 239 aaKnown RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 PACSIN2Q9UNF0 486 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-223ENST00000557076 VDAC3Q9Y277 283 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 ACOT9Q9Y305 439 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 GPR45Q9Y5Y3 372 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 ZNF780BQ9Y6R6 833 aa4.04□□□□□ -1.76
SCFD1-223ENST00000557076 IGKV3D-15A0A087WSY6 115 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 A0A1W2PR80 420 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TMEM129A0AVI4 362 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 CDHR4A6H8M9 788 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 C9JVG2 144 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ATP6V1G2-DDX39BF2Z307 99 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 GOLGA6L19H0YKK7 550 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 PDLIM1O00151 329 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ZNF195O14628 629 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 PLPP2O43688 288 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 PEX14O75381 377 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 RAD51DO75771 328 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 UTS2O95399 124 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 NGFRP08138 427 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 LINGO3P0C6S8 592 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 CTAGE8P0CG41 777 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SAGP10523 405 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 PGAM1P18669 254 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 MDKP21741 143 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 COL8A2P25067 703 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ELK4P28324 431 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms