RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 POMGNT2Q8NAT1 580 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 CHMP6Q96FZ7 201 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 BOD1Q96IK1 185 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 GAL3ST1Q99999 423 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 THUMPD3Q9BV44 507 aaKnown RBP10.64□□□□□ -0.71
PSEN1-220ENST00000557037 SHCBP1LQ9BZQ2 653 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 MARCH7Q9H992 704 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 UBAP1Q9NZ09 502 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 LEF1Q9UJU2 399 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-220ENST00000557037 PURGQ9UJV8 347 aaKnown RBP10.64□□□□□ -0.71
PSEN1-220ENST00000557037 GRID1Q9ULK0 1009 aa10.64□□□□□ -0.71
PSEN1-220ENST00000557037 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 TRIM49D1C9J1S8 452 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 MANBAO00462 879 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 FRS3O43559 492 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 PIP5K1CO60331 668 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 PMS2P2O95744 297 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 CBR1P16152 277 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 CCNA2P20248 432 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 ATP6V1C1P21283 382 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 PAX7P23759 505 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 IVDP26440 423 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 CRABP2P29373 138 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 POU6F2P78424 691 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-220ENST00000557037 CCL8P80075 99 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF154Q13106 437 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 ADGRG3Q86Y34 549 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 ZIC4Q8N9L1 334 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 SLC25A43Q8WUT9 341 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-220ENST00000557037 SGCDQ92629 289 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 ZDHHC16Q969W1 377 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 GIMAP5Q96F15 307 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF385AQ96PM9 386 aaKnown RBP10.63□□□□□ -0.71
PSEN1-220ENST00000557037 ALKBH3Q96Q83 286 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-220ENST00000557037 SLC30A2Q9BRI3 323 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 BTBD2Q9BX70 525 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 NELFAQ9H3P2 528 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 NFU1Q9UMS0 254 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 CACNG2Q9Y698 323 aa10.63□□□□□ -0.71
PSEN1-220ENST00000557037 A0A096LPK6 155 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 A0A1W2PPW3 197 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 C5orf63A6NC05 138 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF503-AS2A6NEH8 195 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF587BE7ETH6 402 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF264O43296 627 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 CLPXO76031 633 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 TYK2P29597 1187 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 SSTR1P30872 391 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 SPRP35270 261 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-220ENST00000557037 CDH13P55290 713 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 SLC17A1Q14916 467 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 FAM83EQ2M2I3 478 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 GLIPR1L2Q4G1C9 344 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 METTL2BQ6P1Q9 378 aaKnown RBP10.62□□□□□ -0.71
PSEN1-220ENST00000557037 LINGO2Q7L985 606 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ABHD12BQ7Z5M8 362 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-220ENST00000557037 CTAGE3PQ8IX95 158 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ZBED8Q8IZ13 594 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 FAM169BQ8N8A8 192 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ST8SIA1Q92185 356 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 CDKL2Q92772 493 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 CDS1Q92903 461 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ACPTQ9BZG2 426 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 CTPS2Q9NRF8 586 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 SLC6A13Q9NSD5 602 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 NECAP2Q9NVZ3 263 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 SEC14L4Q9UDX3 406 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 DUSP13Q9UII6 198 aa10.62□□□□□ -0.71
PSEN1-220ENST00000557037 ISPDA4D126 451 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 CLDN25C9JDP6 229 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 TRAPPC2LH3BP13 241 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 EIF4E2O60573 245 aaKnown RBP10.61□□□□□ -0.71
PSEN1-220ENST00000557037 OR4F21O95013 312 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 UBL4AP11441 157 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 BCKDHAP12694 445 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 PROK1P58294 105 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 H3F3AP84243 136 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 SPIN4Q56A73 249 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 TECRLQ5HYJ1 363 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 MDP1Q86V88 176 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 LINC01006Q8NI28 216 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 ST7LQ8TDW4 575 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 CIDECQ96AQ7 238 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-220ENST00000557037 TMEM45BQ96B21 275 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 MS4A4EQ96PG1 132 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 MRI1Q9BV20 369 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 CHIAQ9BZP6 476 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 HOXD1Q9GZZ0 328 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF385DQ9H6B1 395 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 ACER3Q9NUN7 267 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 TAS2R7Q9NYW3 318 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 HDGFL3Q9Y3E1 203 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 DTNAQ9Y4J8 743 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 NOX1Q9Y5S8 564 aa10.61□□□□□ -0.71
PSEN1-220ENST00000557037 SPIN1Q9Y657 262 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-220ENST00000557037 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-220ENST00000557037 IGHV1-69-2A0A0G2JMI3 117 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 SRRM5B3KS81 715 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms