RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 MYL12AP19105 171 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 HOXD3P31249 432 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 IFNA8P32881 189 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CRATP43155 626 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 GPR12P47775 334 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 OR3A3P47888 321 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 INPP1P49441 399 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 XKP51811 444 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 AP2S1P53680 142 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CCL23P55773 120 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 BTG1P62324 171 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CDK6Q00534 326 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF763Q0D2J5 394 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 COX10Q12887 443 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SLAMF1Q13291 335 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 MAB21L1Q13394 359 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 HEPACAMQ14CZ8 416 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 VEPH1Q14D04 833 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF79Q15937 498 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SOWAHCQ53LP3 525 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 PYDC2Q56P42 97 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 XKR6Q5GH73 641 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 HACD4Q5VWC8 232 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 C12orf73Q69YU5 71 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ANGPTL8Q6UXH0 198 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 MBOAT1Q6ZNC8 495 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 Q6ZPB1 254 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TPRG1Q6ZUI0 275 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 IKBIPQ70UQ0 350 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TSEN54Q7Z6J9 526 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TMEM150AQ86TG1 271 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 THOC6Q86W42 341 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TMC8Q8IU68 726 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 LURAP1LQ8IV03 231 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 LAX1Q8IWV1 398 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SLC34A3Q8N130 599 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 NAGSQ8N159 534 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 DEFB123Q8N688 67 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CLDN19Q8N6F1 224 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 AQP11Q8NBQ7 271 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 DUSP18Q8NEJ0 188 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 NFKBIDQ8NI38 313 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 WDR20Q8TBZ3 569 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TMEM163Q8TC26 289 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CREB3L4Q8TEY5 395 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SKA2Q8WVK7 121 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 DNAJA4Q8WW22 397 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ASZ1Q8WWH4 475 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 PPCDCQ96CD2 204 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 C11orf24Q96F05 449 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 DIRAS2Q96HU8 199 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 IGSF21Q96ID5 467 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 EGLN2Q96KS0 407 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 HYLS1Q96M11 299 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 NEDD4LQ96PU5 975 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SLC35A5Q9BS91 424 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TTYH2Q9BSA4 534 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TSSK6Q9BXA6 273 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 EBPLQ9BY08 206 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 MRPL9Q9BYD2 267 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 PRRG3Q9BZD7 231 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 POLR2J2Q9GZM3 115 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SLC25A18Q9H1K4 315 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 REEP4Q9H6H4 257 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 RNF167Q9H6Y7 350 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 MVB12BQ9H7P6 319 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 NT5DC2Q9H857 520 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 NMNAT1Q9HAN9 279 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SGK2Q9HBY8 427 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF334Q9HCZ1 680 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 RANGRFQ9HD47 186 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 MYNNQ9NPC7 610 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SNTG1Q9NSN8 517 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ACER3Q9NUN7 267 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 RBFOX1Q9NWB1 397 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 PPP1R14DQ9NXH3 145 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 B3GNT2Q9NY97 397 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TAS2R7Q9NYW3 318 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 MUTYHQ9UIF7 546 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CAMK2AQ9UQM7 478 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ITM2BQ9Y287 266 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 EXOSC1Q9Y3B2 195 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 YIPF1Q9Y548 306 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 PRUNE2Q8WUY3 3088 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ANKRD36A6QL64 1941 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 BPTFQ12830 3046 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 A0A0U1RQS6 177 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 FAM240BA0A1B0GVZ2 78 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 A0A1W2PQ72 361 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 A0A1W2PQL4 384 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-246ENST00000557030 A6NL46 340 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 A8MV72 311 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-246ENST00000557030 SGK494L7N484 410 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 FOXE1O00358 373 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-246ENST00000557030 AP3D1O14617 1153 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 TFECO14948 347 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-246ENST00000557030 CHST10O43529 356 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 PRKYO43930 277 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 PCDH7O60245 1069 aa4.3□□□□□ -1.72
ATXN3-246ENST00000557030 DOK2O60496 412 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms