RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SPIN1Q9Y657 262 aaPredicted RBP12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ATP23Q9Y6H3 246 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 IGHV1-18A0A0C4DH31 117 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 AGAP5A6NIR3 686 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FAAHO00519 579 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZNF208O43345 1280 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 IGFBP1P08833 259 aaPredicted RBP12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TACR3P29371 465 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MPGP29372 298 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SPANXN4Q5MJ08 99 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PAQR6Q6TCH4 344 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ARFGAP2Q8N6H7 521 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TMEM99Q8N816 258 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PKNOX2Q96KN3 472 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FOXN4Q96NZ1 517 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZIM3Q96PE6 472 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SORT1Q99523 831 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SHARPINQ9H0F6 387 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SEC61A2Q9H9S3 476 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LPAR3Q9UBY5 353 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PCDHGB4Q9UN71 923 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SLC9A8Q9Y2E8 581 aa12.51□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LIPT2A6NK58 231 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 KLF11O14901 512 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 EIF1BO60739 113 aaKnown RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CPSF4O95639 269 aaKnown RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CSF3P09919 207 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 IL12AP29459 219 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ACAA2P42765 397 aaKnown RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SLC1A3P43003 542 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 POLR2HP52434 150 aaKnown RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SLC35A1P78382 337 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 EPS8Q12929 822 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MAD2L1Q13257 205 aaPredicted RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PDCD2Q16342 344 aaPredicted RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 COX20Q5RI15 118 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FAM120AOSQ5T036 256 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MYPOPQ86VE0 399 aaPredicted RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 RNF130Q86XS8 419 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ANKS4BQ8N8V4 417 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 OR9K2Q8NGE7 335 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CCDC115Q96NT0 180 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CHST2Q9Y4C5 530 aa12.5□□□□□ -0.41
CHMP4BP1-201ENST00000556017 AQP7P3A6NL99 342 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 AKR7A3O95154 331 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 AGR2O95994 175 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ALDOCP09972 364 aaKnown RBP12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CDKN2CP42773 168 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 HTR3AP46098 478 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 GZMKP49863 264 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 KHKP50053 298 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MVDP53602 400 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CHRNB3Q05901 458 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 GGTLC2Q14390 218 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ADIPOQQ15848 244 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZSWIM7Q19AV6 140 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 GPAT3Q53EU6 434 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MRPL2Q5T653 305 aaKnown RBP12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 C1QTNF12Q5T7M4 302 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ATAD3BQ5T9A4 648 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 DEPDC4Q8N2C3 294 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TRNT1Q96Q11 434 aaKnown RBP12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SLC35A5Q9BS91 424 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 RSPO3Q9BXY4 272 aaPredicted RBP12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 DPY30Q9C005 99 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SLC6A13Q9NSD5 602 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 RLIMQ9NVW2 624 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PARPBPQ9NWS1 579 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CRNNQ9UBG3 495 aaPredicted RBP12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 UPB1Q9UBR1 384 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MARCOQ9UEW3 520 aaPredicted RBP12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 HAO1Q9UJM8 370 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PMF1-BGLAPU3KQ54 211 aa12.49□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NR5A2O00482 541 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NPIPB7O75200 414 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SRD5A1P18405 259 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CALCRP30988 508 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SELENOPP49908 381 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PDLIM4P50479 330 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PRPS1P60891 318 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TGFBR3Q03167 851 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CEACAM7Q14002 265 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FAM174BQ3ZCQ3 159 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 OTUD3Q5T2D3 398 aaPredicted RBP12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LRRC74BQ6ZQY2 392 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CMIPQ8IY22 773 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PMM1Q92871 262 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 DDIT4LQ96D03 193 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 AURKBQ96GD4 344 aaPredicted RBP12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SF3B5Q9BWJ5 86 aaKnown RBP12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CHODLQ9H9P2 273 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CA10Q9NS85 328 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms