RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 GSX1Q9H4S2 264 aaPredicted RBP13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 TRAPPC4Q9Y296 219 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 IFT52Q9Y366 437 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 A0A1W2PR80 420 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 HS3ST1O14792 307 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 EDF1O60869 148 aaKnown RBP13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 AKR7A3O95154 331 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 PGM3O95394 542 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 FKBP2P26885 142 aaKnown RBP13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 H3F3AP84243 136 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 PPA1Q15181 289 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 OTUD3Q5T2D3 398 aaPredicted RBP13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 C9orf135Q5VTT2 229 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 FBXW9Q5XUX1 488 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 ADAM5Q6NVV9 412 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 ZNF433Q8N7K0 673 aaPredicted RBP13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 TMEM99Q8N816 258 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 PIGTQ969N2 578 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 PIP5K1AQ99755 562 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 CPPED1Q9BRF8 314 aaPredicted RBP13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 NAA11Q9BSU3 229 aaPredicted RBP13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 ZNF385DQ9H6B1 395 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 ADPRHL2Q9NX46 363 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 NPAP1Q9NZP6 1156 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 ZNF232Q9UNY5 417 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 RNF115Q9Y4L5 304 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
EFCAB11-207ENST00000555608 LIPT2A6NK58 231 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 TMEM229AB2RXF0 380 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 GPR171O14626 319 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 MRPL33O75394 65 aaKnown RBP13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 GPIP06744 558 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 CD3EP07766 207 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 ITGA5P08648 1049 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 GGT1P19440 569 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 AQP1P29972 269 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 CDK6Q00534 326 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 SF3A3Q12874 501 aaKnown RBP eCLIP13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 FAPQ12884 760 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 SCARB2Q14108 478 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 SELPLGQ14242 412 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 GLIPR1L2Q4G1C9 344 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 PAQR6Q6TCH4 344 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 LILRB1Q8NHL6 650 aaPredicted RBP13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 ZNF385AQ96PM9 386 aaKnown RBP13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 SMR3AQ99954 134 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 ARMC7Q9H6L4 198 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 SLC9A8Q9Y2E8 581 aa13.1□□□□□ -0.31
EFCAB11-207ENST00000555608 A0A0G2JND7 137 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 A0A1W2PP18 115 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 CIB4A0PJX0 185 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 DPRXA6NFQ7 191 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 CCT8L1PA6NM43 557 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 A8MVM7 634 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 TPST1O60507 370 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 PTNP21246 168 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 HTR2AP28223 471 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 PTH2RP49190 550 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 SLC17A1Q14916 467 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 C1orf140Q5VVS0 124 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 SHEQ5VZ18 495 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 DLEU7Q6UYE1 221 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 YTHDF3Q7Z739 585 aaKnown RBP13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 DHDDSQ86SQ9 333 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 GPAT4Q86UL3 456 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 RETREG3Q86VR2 466 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 LRRC75A-AS1Q8N1F1 130 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 IGFBPL1Q8WX77 278 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 Q96MF0 132 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 PRR14Q9BWN1 585 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 TAPBPLQ9BX59 468 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 SLC7A10Q9NS82 523 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 ASB6Q9NWX5 421 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 MALT1Q9UDY8 824 aa13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 LEF1Q9UJU2 399 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-207ENST00000555608 OR5H1A6NKK0 313 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 AQP7P3A6NL99 342 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 ARHGEF9O43307 516 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 CNOT4O95628 575 aaKnown RBP13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 ETS2P15036 469 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 MAP2K6P52564 334 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 MTPNP58546 118 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 SPOCK1Q08629 439 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 ZSWIM7Q19AV6 140 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 TIMM23BQ5SRD1 257 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 TSPO2Q5TGU0 170 aa13.08□□□□□ -0.32
EFCAB11-207ENST00000555608 REEP3Q6NUK4 255 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms