RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CRNKL1Q9BZJ0 848 aaKnown RBP1□□□□□ -2.25
SRP54-207ENST00000555535 C20orf85Q9H1P6 137 aa1□□□□□ -2.25
SRP54-207ENST00000555535 ACTR8Q9H981 624 aa1□□□□□ -2.25
SRP54-207ENST00000555535 ROPN1Q9HAT0 212 aaPredicted RBP1□□□□□ -2.25
SRP54-207ENST00000555535 NGBQ9NPG2 151 aa1□□□□□ -2.25
SRP54-207ENST00000555535 ANO10Q9NW15 660 aa1□□□□□ -2.25
SRP54-207ENST00000555535 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1□□□□□ -2.25
SRP54-207ENST00000555535 MOSPD1Q9UJG1 213 aa1□□□□□ -2.25
SRP54-207ENST00000555535 V9GY05 133 aa1□□□□□ -2.25
SRP54-207ENST00000555535 SHANK1Q9Y566 2161 aa1□□□□□ -2.25
SRP54-207ENST00000555535 CARMIL3Q8ND23 1372 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 IGLV3-12A0A075B6K2 115 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 LRRC30A6NM36 301 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ANKRD30BLA7E2S9 258 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 CCER2I3L3R5 266 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 RRP8O43159 456 aaKnown RBP0.99□□□□□ -2.25
SRP54-207ENST00000555535 DUX1O43812 170 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ADRA2AP08913 450 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 P0C880 135 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 RRASP10301 218 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 CLUP10909 449 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 UQCRBP14927 111 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 RABIFP47224 123 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ATXN3P54252 364 aaPredicted RBP0.99□□□□□ -2.25
SRP54-207ENST00000555535 DLX1P56177 255 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 CNTN2Q02246 1040 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 REG3AQ06141 175 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 SLC39A6Q13433 755 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 NSUN5P1Q3KNT7 163 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ADPRMQ3LIE5 342 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 BOLA3Q53S33 107 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 NCR3LG1Q68D85 454 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 RAB12Q6IQ22 244 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 FAHD2BQ6P2I3 314 aaPredicted RBP0.99□□□□□ -2.25
SRP54-207ENST00000555535 ARL10Q8N8L6 244 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ATP6V0D2Q8N8Y2 350 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 C15orf56Q8N910 161 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 OR51G2Q8NGK0 314 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 OR9G1Q8NH87 305 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 GIPC3Q8TF64 312 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 SLC13A3Q8WWT9 602 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 EXOSC8Q96B26 276 aaKnown RBP0.99□□□□□ -2.25
SRP54-207ENST00000555535 FAHD2AQ96GK7 314 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 BMFQ96LC9 184 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 VSTM2LQ96N03 204 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 COL21A1Q96P44 957 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 TMEM237Q96Q45 408 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ATP6V0BQ99437 205 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 TBCDQ9BTW9 1192 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ZNF416Q9BWM5 594 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 RAB17Q9H0T7 212 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 DHX33Q9H6R0 707 aaKnown RBP0.99□□□□□ -2.25
SRP54-207ENST00000555535 SLC40A1Q9NP59 571 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 PRMT8Q9NR22 394 aaPredicted RBP0.99□□□□□ -2.25
SRP54-207ENST00000555535 RDH8Q9NYR8 311 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 TRIM10Q9UDY6 481 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 ATP6V1HQ9UI12 483 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 TRAF3IP3Q9Y228 551 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 HEBP2Q9Y5Z4 205 aa0.99□□□□□ -2.25
SRP54-207ENST00000555535 SHROOM3Q8TF72 1996 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 KRT87PA6NCN2 255 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 VSTM2BA6NLU5 285 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 SDHDO14521 159 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 JAK2O60674 1132 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 TOM1L1O75674 476 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 F10P00742 488 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 CXCL10P02778 98 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 MT-ND3P03897 115 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 FUT1P19526 365 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 CXCR2P25025 360 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 BTCP35070 178 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 PTGFRP43088 359 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 RIPPLY1Q0D2K3 151 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 SPP2Q13103 211 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 USH1GQ495M9 461 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 LRRC10Q5BKY1 277 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 FBXW9Q5XUX1 488 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 RAET1GQ6H3X3 334 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 ACSM5Q6NUN0 579 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 KCNIP4Q6PIL6 250 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 ZNF620Q6ZNG0 422 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 KIAA1328Q86T90 577 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 ELMOD2Q8IZ81 293 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 ANKRD20A12PQ8NF67 263 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 OR10G3Q8NGC4 313 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 OR56B1Q8NGI3 324 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 OR5W2Q8NH69 310 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 FGF11Q92914 225 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 NCLNQ969V3 563 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 NAT9Q9BTE0 207 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 SELENOIQ9C0D9 397 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 ROGDIQ9GZN7 287 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 DNTTIP1Q9H147 329 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 CLMPQ9H6B4 373 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 LPAR2Q9HBW0 351 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 MRPL39Q9NYK5 338 aaKnown RBP0.98□□□□□ -2.25
SRP54-207ENST00000555535 OARD1Q9Y530 152 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 AP4B1Q9Y6B7 739 aa0.98□□□□□ -2.25
SRP54-207ENST00000555535 FAM230AA0A1W2PPH8 454 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 PLAC8L1A1L4L8 177 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms