RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 EHD1Q9H4M9 534 aa3.93□□□□□ -1.78
VRK1-205ENST00000555402 ZNF702PQ9H963 129 aa3.93□□□□□ -1.78
VRK1-205ENST00000555402 CTNNA3Q9UI47 895 aa3.93□□□□□ -1.78
VRK1-205ENST00000555402 CA5BQ9Y2D0 317 aa3.93□□□□□ -1.78
VRK1-205ENST00000555402 NPTNQ9Y639 398 aa3.93□□□□□ -1.78
VRK1-205ENST00000555402 CCDC169A6NNP5 214 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 AP3B1O00203 1094 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 IGHV3-23P01764 117 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 P0C879 139 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 ATP6V1B2P21281 511 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 CDH4P55283 916 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 ASPHQ12797 758 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 MRPL28Q13084 256 aaKnown RBP3.92□□□□□ -1.78
VRK1-205ENST00000555402 NSUN5P1Q3KNT7 163 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 PGAP1Q75T13 922 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 PPP1R27Q86WC6 154 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 FTMTQ8N4E7 242 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 TMEM252Q8N6L7 170 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 OR52H1Q8NGJ2 320 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 MAGEE2Q8TD90 523 aaPredicted RBP3.92□□□□□ -1.78
VRK1-205ENST00000555402 FGF11Q92914 225 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 SMIM14Q96QK8 99 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 TRIM62Q9BVG3 475 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 PKIBQ9C010 78 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 METTL7AQ9H8H3 244 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 TNFRSF19Q9NS68 423 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 ETNK2Q9NVF9 386 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 THUMPD1Q9NXG2 353 aaKnown RBP3.92□□□□□ -1.78
VRK1-205ENST00000555402 HOXC10Q9NYD6 342 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 TREM2Q9NZC2 230 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 CD274Q9NZQ7 290 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 DCDC2Q9UHG0 476 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 STAP1Q9ULZ2 295 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 IFT52Q9Y366 437 aa3.92□□□□□ -1.78
VRK1-205ENST00000555402 XKRY2A2RUG3 117 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 FAM47DPA6NHR8 397 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 DCTN6O00399 190 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 CIB2O75838 187 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 HSPB1P04792 205 aaKnown RBP3.91□□□□□ -1.78
VRK1-205ENST00000555402 ZBTB25P24278 435 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 RFC4P35249 363 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 RPS14P62263 151 aaKnown RBP3.91□□□□□ -1.78
VRK1-205ENST00000555402 BST1Q10588 318 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 PLD1Q13393 1074 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 GRB7Q14451 532 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 OXA1LQ15070 435 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 SSX2Q16385 188 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 DUSP7Q16829 419 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 ISXQ2M1V0 245 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 PRR30Q53SZ7 412 aaPredicted RBP3.91□□□□□ -1.78
VRK1-205ENST00000555402 PRAMEF5Q5TYX0 476 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 PRAMEF6Q5VXH4 476 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 OR52E8Q6IFG1 317 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 GDPD3Q7L5L3 318 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 TRIM69Q86WT6 500 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 VRK2Q86Y07 508 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 ECHDC2Q86YB7 292 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 ALLCQ8N6M5 410 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 LINC00612Q8N6U2 182 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 OR4K14Q8NGD5 310 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 RNF139Q8WU17 664 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 UFD1Q92890 307 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 CNDP1Q96KN2 507 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 MAGEB18Q96M61 343 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 CFAP53Q96M91 514 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 ZNF641Q96N77 438 aaPredicted RBP3.91□□□□□ -1.78
VRK1-205ENST00000555402 NICN1Q9BSH3 213 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 AZI2Q9H6S1 392 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 TRAF3IP3Q9Y228 551 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 RPL36Q9Y3U8 105 aaKnown RBP3.91□□□□□ -1.78
VRK1-205ENST00000555402 ABCA7Q8IZY2 2146 aa3.91□□□□□ -1.78
VRK1-205ENST00000555402 TNRQ92752 1358 aa3.9□□□□□ -1.78
VRK1-205ENST00000555402 IGLV3-10A0A075B6K4 115 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 MBTPS2O43462 519 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 SRSF10O75494 262 aaKnown RBP3.9□□□□□ -1.79
VRK1-205ENST00000555402 STAMBPO95630 424 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 SLC2A3P11169 496 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 GDI1P31150 447 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 SHMT2P34897 504 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 PTGDSP41222 190 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 TPMTP51580 245 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 GPM6AP51674 278 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 CDK16Q00536 496 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 ZNF45Q02386 682 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 CTSL3PQ5NE16 218 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 UNQ9370/PRO34162Q6UXP9 181 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 C14orf178Q8N769 122 aaPredicted RBP3.9□□□□□ -1.79
VRK1-205ENST00000555402 TRPV1Q8NER1 839 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 OR9K2Q8NGE7 335 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 IFT74Q96LB3 600 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 FMO2Q99518 471 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 CHRDL1Q9BU40 450 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 FOLH1BQ9HBA9 442 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 NMRK1Q9NWW6 199 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 ZNF639Q9UID6 485 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 BTNL2Q9UIR0 455 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 V9GY05 133 aa3.9□□□□□ -1.79
VRK1-205ENST00000555402 ATP10AO60312 1499 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms