RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 EXOSC3Q9NQT5 275 aaKnown RBP13.2□□□□□ -0.3
NUMB-216ENST00000555394 TBCCD1Q9NVR7 557 aa13.2□□□□□ -0.3
NUMB-216ENST00000555394 PCDHGB6Q9Y5F9 930 aa13.2□□□□□ -0.3
NUMB-216ENST00000555394 A0A1W2PQL4 384 aaPredicted RBP13.19□□□□□ -0.3
NUMB-216ENST00000555394 GABRPO00591 440 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 MAGEB4O15481 346 aaPredicted RBP13.19□□□□□ -0.3
NUMB-216ENST00000555394 ITPKBP27987 946 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 FGF9P31371 208 aaPredicted RBP13.19□□□□□ -0.3
NUMB-216ENST00000555394 RAB15P59190 212 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 ACY1Q03154 408 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 ZNF85Q03923 595 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 RUNX1T1Q06455 604 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 ZNF74Q16587 644 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 NKAIN1Q4KMZ8 207 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 DPY19L2P2Q6ZN68 376 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 PLEKHG7Q6ZR37 379 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 PRR23CQ6ZRP0 262 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
NUMB-216ENST00000555394 ASB15Q8WXK1 588 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 KTI12Q96EK9 354 aaPredicted RBP13.19□□□□□ -0.3
NUMB-216ENST00000555394 SDHCQ99643 169 aaPredicted RBP13.19□□□□□ -0.3
NUMB-216ENST00000555394 SLC30A2Q9BRI3 323 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 MARCH7Q9H992 704 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 APMAPQ9HDC9 416 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 ZMIZ1Q9ULJ6 1067 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 SRPK3Q9UPE1 567 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 GSTK1Q9Y2Q3 226 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 NDUFB5O43674 189 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 GDF9O60383 454 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 SCRG1O75711 98 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 PNMTP11086 282 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 ETV6P41212 452 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 OR12D2P58182 307 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 TMEM91Q6ZNR0 172 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 MARCH9Q86YJ5 346 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 THAP3Q8WTV1 239 aaPredicted RBP13.19□□□□□ -0.3
NUMB-216ENST00000555394 RELTQ969Z4 430 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 CCDC74BQ96LY2 380 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 IER2Q9BTL4 223 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 SLC19A3Q9BZV2 496 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 LAT2Q9GZY6 243 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 NRIP3Q9NQ35 241 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 ASB6Q9NWX5 421 aa13.19□□□□□ -0.3
NUMB-216ENST00000555394 OR6C68A6NDL8 312 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 IDSB3KWA1 339 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 J3QLW9 94 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 TO15178 435 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ZNF19P17023 458 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 RPS4XP62701 263 aaKnown RBP13.18□□□□□ -0.3
NUMB-216ENST00000555394 ARMC4Q5T2S8 1044 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 RPTNQ6XPR3 784 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ZNF441Q8N8Z8 693 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 NPEPL1Q8NDH3 523 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 OR4D9Q8NGE8 314 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 C4orf36Q96KX1 117 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 TGIF2Q9GZN2 237 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 CCDC86Q9H6F5 360 aaKnown RBP13.18□□□□□ -0.3
NUMB-216ENST00000555394 NANSQ9NR45 359 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 LAMTOR5O43504 91 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 TFP02787 698 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 GRK6P43250 576 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 RANBP1P43487 201 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ZMAT1Q5H9K5 638 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 RABEPKQ7Z6M1 372 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 DDOQ99489 341 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ABCB9Q9NP78 766 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 MMP25Q9NPA2 562 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 C14orf119Q9NWQ9 140 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 HAO2Q9NYQ3 351 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ASCC3Q8N3C0 2202 aaKnown RBP13.18□□□□□ -0.3
NUMB-216ENST00000555394 IQCMA0A1B0GVH7 501 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 SAGE2PA6NJ88 616 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 LOC110117498-PIK3R3F6TDL0 507 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 CASKO14936 926 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 RNF13O43567 381 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 SCO2O43819 266 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ZNF354AO60765 605 aaPredicted RBP13.18□□□□□ -0.3
NUMB-216ENST00000555394 NCR1O76036 304 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 HLA-DPB1P04440 258 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 NAA10P41227 235 aaPredicted RBP13.18□□□□□ -0.3
NUMB-216ENST00000555394 PSPHP78330 225 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ZXDAP98168 799 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 E2F1Q01094 437 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ZNF181Q2M3W8 571 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 C1QL3Q5VWW1 255 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 LCN10Q6JVE6 187 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 LYPD4Q6UWN0 246 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 SLC43A2Q8N370 569 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 Q96M85 177 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 TMEM43Q9BTV4 400 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
NUMB-216ENST00000555394 AKIRIN1Q9H9L7 192 aaPredicted RBP13.18□□□□□ -0.3
NUMB-216ENST00000555394 PRMT8Q9NR22 394 aaPredicted RBP13.18□□□□□ -0.3
NUMB-216ENST00000555394 IGLV3-12A0A075B6K2 115 aa13.17□□□□□ -0.3
NUMB-216ENST00000555394 FAM171A2A8MVW0 826 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms