RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MEPEQ9NQ76 525 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 ALKBH4Q9NXW9 302 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 RHCGQ9UBD6 479 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 CLCF1Q9UBD9 225 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 TINAGQ9UJW2 476 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 ZNF175Q9Y473 711 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 FAM215AQ9Y5M1 114 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 TRAV36DV7A0A075B6V5 113 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 A0A087WUU8 490 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 TRGV8A0A0C4DH27 118 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 A0A1B0GUH1 482 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 MBD3L4A6NDZ8 208 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-219ENST00000555323 MBD3L3A6NE82 208 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-219ENST00000555323 MBD3L5A6NJ08 208 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-219ENST00000555323 LIPT2A6NK58 231 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 CXCL13O43927 109 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
SYNE2-219ENST00000555323 FKBP6O75344 327 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 AHSA1O95433 338 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 MT-ND1P03886 318 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 IDUAP35475 653 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 TIMP3P35625 211 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 LIMS1P48059 325 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 SLC35A1P78382 337 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 LTBQ06643 244 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 KPNB1Q14974 876 aaKnown RBP11.36□□□□□ -0.59
SYNE2-219ENST00000555323 SGCBQ16585 318 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 ZNF239Q16600 458 aaKnown RBP11.36□□□□□ -0.59
SYNE2-219ENST00000555323 FAM69AQ5T7M9 428 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 C1orf185Q5T7R7 199 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 OR2T5Q6IEZ7 315 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 B3GNT6Q6ZMB0 384 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 SEM1Q6ZVN7 128 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 OR2T29Q8NH02 315 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 MBD3L2Q8NHZ7 208 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-219ENST00000555323 RNF217Q8TC41 542 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 SLC7A13Q8TCU3 470 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 TMEM255BQ8WV15 326 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 LIPHQ8WWY8 451 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 TAAR8Q969N4 342 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 TTYH2Q9BSA4 534 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 SRXN1Q9BYN0 137 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 KLHL4Q9C0H6 718 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 YY1AP1Q9H869 796 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 MEMO1Q9Y316 297 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 CFAP46Q8IYW2 2715 aa11.36□□□□□ -0.59
SYNE2-219ENST00000555323 ERICH4A6NGS2 130 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 TOXO94900 526 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 GADD45GO95257 159 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 TGM6O95932 706 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 MT-ATP6P00846 226 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 GLI4P10075 376 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 PLA2G2AP14555 144 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 FPR1P21462 350 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 RRM2P31350 389 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 CEACAM8P31997 349 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-219ENST00000555323 RPS5P46782 204 aaKnown RBP11.35□□□□□ -0.59
SYNE2-219ENST00000555323 UQCRFS1P47985 274 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 UGT2B15P54855 530 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 CTBP2P56545 445 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 PRKCDQ05655 676 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 MFSD13AQ14CX5 517 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 PON3Q15166 354 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 C4orf17Q53FE4 359 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 TMEM211Q6ICI0 200 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 PAQR6Q6TCH4 344 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 RPTNQ6XPR3 784 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 MBOAT2Q6ZWT7 520 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 OR4C15Q8NGM1 316 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 PRR7Q8TB68 274 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 RSRC1Q96IZ7 334 aaKnown RBP11.35□□□□□ -0.59
SYNE2-219ENST00000555323 TRIB1Q96RU8 372 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 RNF122Q9H9V4 155 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 MCTS1Q9ULC4 181 aaKnown RBP11.35□□□□□ -0.59
SYNE2-219ENST00000555323 MED31Q9Y3C7 131 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 AP4S1Q9Y587 144 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 PRRC2CQ9Y520 2896 aaKnown RBP11.35□□□□□ -0.59
SYNE2-219ENST00000555323 ESPL1Q14674 2120 aa11.35□□□□□ -0.59
SYNE2-219ENST00000555323 TRBV4-1A0A0J9YWV2 114 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 SH3PXD2BA1X283 911 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 SLC22A20A6NK97 555 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 KDM4EB2RXH2 506 aaPredicted RBP11.34□□□□□ -0.59
SYNE2-219ENST00000555323 HNRNPRO43390 633 aaKnown RBP11.34□□□□□ -0.59
SYNE2-219ENST00000555323 RCBTB2O95199 551 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 CST1P01037 141 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 BGLAPP02818 100 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 ENPP1P22413 925 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 ERFP50548 548 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 P2RY4P51582 365 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 OR2B6P58173 313 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 LSM11P83369 360 aaKnown RBP eCLIP11.34□□□□□ -0.59
SYNE2-219ENST00000555323 PDK3Q15120 406 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 OR7A5Q15622 319 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 ZNF74Q16587 644 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 ZFP1Q6P2D0 407 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 PODNL1Q6PEZ8 512 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 TMPRSS11FQ6ZWK6 438 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 LSRQ86X29 649 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms