RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 BCL9O00512 1426 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 WNK2Q9Y3S1 2297 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 KLHL33A6NCF5 533 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 F6UZH7 168 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MAGEB4O15481 346 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SSTR2P30874 369 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF322Q6U7Q0 402 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MAMDC4Q6UXC1 1216 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 AAED1Q7RTV5 226 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 EGFL6Q8IUX8 553 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CPXM2Q8N436 756 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF516Q92618 1163 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MMP28Q9H239 520 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ARL2-SNX15V9GYD0 113 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 KRBA1A5PL33 1030 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 NDUFB2O95178 105 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 NSA2O95478 260 aaKnown RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 LAMP1P11279 417 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 DRD2P14416 443 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CD1DP15813 335 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CEBPBP17676 345 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 NTF3P20783 257 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CD70P32970 193 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CXCL12P48061 93 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 GPR17Q13304 367 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 PLA1AQ53H76 456 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MMP21Q8N119 569 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR10G3Q8NGC4 313 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR4M1Q8NGD0 313 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 GGHQ92820 318 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 TSSK2Q96PF2 358 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 HEYLQ9NQ87 328 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 FMN2Q9NZ56 1722 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 AGLP35573 1532 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SLC16A7O60669 478 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CA3P07451 260 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 PIPP12273 146 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CARD18P57730 90 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 IRF4Q15306 451 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MICAQ29983 383 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 COMMD6Q7Z4G1 85 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR5AR1Q8NGP9 310 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 NANPQ8TBE9 248 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 PEBP4Q96S96 227 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CACNA1IQ9P0X4 2223 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 TP53BP1Q12888 1972 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MCRIP1C9JLW8 97 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 RNF225M0QZC1 329 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SPINT2O43291 252 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 PRKYO43930 277 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MITFO75030 526 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 P2RX3P56373 397 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 KCNAB2Q13303 367 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 WBP2NLQ6ICG8 309 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SLC22A25Q6T423 547 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 GDPD3Q7L5L3 318 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 TUSC5Q8IXB3 177 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CHST14Q8NCH0 376 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SLC30A7Q8NEW0 376 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 AKR1E2Q96JD6 320 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 S1PR3Q99500 378 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SLC2A11Q9BYW1 496 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ELOVL3Q9HB03 270 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SCPEP1Q9HB40 452 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF207O43670 478 aaKnown RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 TBX10O75333 385 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 GYPBP06028 91 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 HNRNPA2B1P22626 353 aaKnown RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 GIFP27352 417 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MEOX1P50221 254 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SPATS1Q496A3 300 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR8G2PQ6IF36 304 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR8J3Q8NGG0 315 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR4Q3Q8NH05 313 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 RLN3Q8WXF3 142 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR11A1Q9GZK7 315 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 P4HTMQ9NXG6 502 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 COPS3Q9UNS2 423 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 GAB2Q9UQC2 676 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 PRELID3BQ9Y3B1 194 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ANKRD26Q9UPS8 1709 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 IGHV3-64DA0A0J9YX35 117 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 M0R1B8 84 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ABCD4O14678 606 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR1D4P47884 311 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CDC34P49427 236 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR8G1Q15617 311 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SSX9Q7RTT3 188 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 TMEFF1Q8IYR6 380 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 APCDD1Q8J025 514 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 KDF1Q8NAX2 398 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MTHFD2LQ9H903 347 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 VIRMAQ69YN4 1812 aaKnown RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 A0A0U1RQF3 1178 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MFGE8Q08431 387 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CAMK2BQ13554 666 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR4D1Q15615 310 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 C10orf62Q5T681 223 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms