RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SLC30A8Q8IWU4 369 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 MCEMP1Q8IX19 187 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 LSMEM1Q8N8F7 131 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 FAM156AQ8NDB6 213 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 OR6K3Q8NGY3 331 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 LINC01560Q8TB33 94 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 KTI12Q96EK9 354 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-214ENST00000554928 LRRC37BQ96QE4 947 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 MCHR1Q99705 422 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 HOPXQ9BPY8 73 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-214ENST00000554928 PIGMQ9H3S5 423 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 TIGARQ9NQ88 270 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 CRIM1Q9NZV1 1036 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 TMEM181Q9P2C4 612 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 TESQ9UGI8 421 aaKnown RBP10.99□□□□□ -0.65
SYNE2-214ENST00000554928 TAGLN3Q9UI15 199 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 PROCRQ9UNN8 238 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 FTCDNL1E5RQL4 147 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 MSTNO14793 375 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 DCTN3O75935 186 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 PRKD3O94806 890 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 AKR7A3O95154 331 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 CD8BP10966 210 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 IDUAP35475 653 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 OR1E2P47887 323 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 CLK1P49759 484 aaKnown RBP10.98□□□□□ -0.65
SYNE2-214ENST00000554928 P2RY4P51582 365 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 CTBP2P56545 445 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 H3F3AP84243 136 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 LTBQ06643 244 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 RASGEF1BQ0VAM2 473 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 EXOC3L2Q2M3D2 409 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 ALG10BQ5I7T1 473 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 ENTPD8Q5MY95 495 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 C1orf140Q5VVS0 124 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 ARPINQ7Z6K5 226 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 VTCN1Q7Z7D3 282 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 CARM1Q86X55 608 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 TMEM99Q8N816 258 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 CCDC197Q8NCU1 140 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 RBM15BQ8NDT2 890 aaKnown RBP10.98□□□□□ -0.65
SYNE2-214ENST00000554928 SLC26A7Q8TE54 656 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 ZNF559Q9BR84 538 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 POTEKPQ9BYX7 375 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 TRIM2Q9C040 744 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 BCO1Q9HAY6 547 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 PLSCR4Q9NRQ2 329 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 KLHL28Q9NXS3 571 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 RPS6KB2Q9UBS0 482 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 SLC13A4Q9UKG4 626 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 TRAPPC4Q9Y296 219 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 EMC9Q9Y3B6 208 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 DCHS2Q6V1P9 2916 aa10.98□□□□□ -0.65
SYNE2-214ENST00000554928 CENPEQ02224 2701 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 ELOA3DA6NLF2 546 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-214ENST00000554928 A8MVM7 634 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 LRRN3E7EW58 273 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 CXCR6O00574 342 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 C8BP07358 591 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 YES1P07947 543 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 T-ENOLP0DO92 83 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 CBLP22681 906 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 MSX2P35548 267 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-214ENST00000554928 RPS5P46782 204 aaKnown RBP10.97□□□□□ -0.65
SYNE2-214ENST00000554928 NCALDP61601 193 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 CSNK2A1P68400 391 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-214ENST00000554928 RNPS1Q15287 305 aaKnown RBP10.97□□□□□ -0.65
SYNE2-214ENST00000554928 TSC22D1Q15714 1073 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 ELOA3BQ3SY89 546 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 GKAP1Q5VSY0 366 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-214ENST00000554928 ANKRD34AQ69YU3 496 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 TFAP2EQ6VUC0 442 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 BHLHE22Q8NFJ8 381 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-214ENST00000554928 ELOA3Q8NG57 546 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 RNF217Q8TC41 542 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 SLC38A4Q969I6 547 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 TAAR8Q969N4 342 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 ALG2Q9H553 416 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 TMEM27Q9HBJ8 222 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 ADPRHL2Q9NX46 363 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 EGFL7Q9UHF1 273 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 PRSS50Q9UI38 385 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 SH3GLB1Q9Y371 365 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 SNX13Q9Y5W8 968 aa10.97□□□□□ -0.65
SYNE2-214ENST00000554928 IGKV3D-15A0A087WSY6 115 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 A0A087WUJ7 227 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 CD79BP40259 229 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 KIR2DL3P43628 341 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 SLC35A1P78382 337 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 FOXD4Q12950 439 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-214ENST00000554928 KRT72Q14CN4 511 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 TMEM201Q5SNT2 666 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 OTUD3Q5T2D3 398 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-214ENST00000554928 ULK3Q6PHR2 472 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 DEF8Q6ZN54 512 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 RANBP3LQ86VV4 465 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-214ENST00000554928 SLC43A2Q8N370 569 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 KDM8Q8N371 416 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 FAM86B1Q8N7N1 296 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms