RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 FBXL2Q9UKC9 423 aa3.74□□□□□ -1.81
VTI1B-203ENST00000554636 ACAD8Q9UKU7 415 aa3.74□□□□□ -1.81
VTI1B-203ENST00000554636 CAMK2AQ9UQM7 478 aa3.74□□□□□ -1.81
VTI1B-203ENST00000554636 TMED5Q9Y3A6 229 aa3.74□□□□□ -1.81
VTI1B-203ENST00000554636 PDZD2O15018 2839 aa3.74□□□□□ -1.81
VTI1B-203ENST00000554636 MPDZO75970 2070 aa3.74□□□□□ -1.81
VTI1B-203ENST00000554636 IGLV3-32A0A0A0MS00 114 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 MBD3L5A6NJ08 208 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 TTC36A6NLP5 189 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SCAMP2O15127 329 aaKnown RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 RGS16O15492 202 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 HCRTR2O43614 444 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ITM2AO43736 263 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SCO2O43819 266 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 FADS1O60427 444 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ZIC3O60481 467 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SKAP2O75563 359 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 LYPLA1O75608 230 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 CBR3O75828 277 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 NKX2-2O95096 273 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 UTS2O95399 124 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 NTN1O95631 604 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 EPPINO95925 133 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ACTL6AO96019 429 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SERPINE1P05121 402 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ACP2P11117 423 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 PRPS2P11908 318 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 CPN1P15169 458 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ZNF708P17019 499 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 EFNA1P20827 205 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 TCEA1P23193 301 aaKnown RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 IL12BP29460 328 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SSTR2P30874 369 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 GABRA3P34903 492 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 TIMP3P35625 211 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 KRT20P35900 424 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 HPCAL1P37235 193 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ASMTP46597 345 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 CPA2P48052 419 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 LHX2P50458 406 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 PNLIPRP2P54317 469 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 CLDN18P56856 261 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 MRPS22P82650 360 aaKnown RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 GAB1Q13480 694 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 FHL3Q13643 280 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 PTGR1Q14914 329 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 TOMM20Q15388 145 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 DUSP5Q16690 384 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 GRAMD1BQ3KR37 738 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 FBXL19-AS1Q494R0 122 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 GALNTL6Q49A17 601 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ATP6AP1LQ52LC2 224 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 C6orf136Q5SQH8 315 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 NSUN5P2Q63ZY6 315 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 OR5M10Q6IEU7 315 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 MFSD12Q6NUT3 480 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 APOOLQ6UXV4 268 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 KRT73Q86Y46 540 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 PLCZ1Q86YW0 608 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 LACC1Q8IV20 430 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 DDIASQ8IXT1 998 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 PM20D2Q8IYS1 436 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ZNF781Q8N8C0 355 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 OR2M3Q8NG83 312 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 FBXO30Q8TB52 745 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 FAM110BQ8TC76 370 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 PIK3R3Q92569 461 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ABTB1Q969K4 478 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 TMCO6Q96DC7 493 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ZBED6CLQ96FA7 236 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 RMND5BQ96G75 393 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SFXN2Q96NB2 322 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ZIM3Q96PE6 472 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 MS4A4EQ96PG1 132 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SORT1Q99523 831 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SH3GL2Q99962 352 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 TUBA1CQ9BQE3 449 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 WACQ9BTA9 647 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 C1orf50Q9BV19 199 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 EML4Q9HC35 981 aaKnown RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 Q9N2J8 555 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 KCNJ16Q9NPI9 418 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 EQTNQ9NQ60 294 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ACSS1Q9NUB1 689 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 FAM120CQ9NX05 1096 aaKnown RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ALKBH4Q9NXW9 302 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 CLCF1Q9UBD9 225 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 BAIAP2L1Q9UHR4 511 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 HAO1Q9UJM8 370 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 ABCG2Q9UNQ0 655 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 MRPS18CQ9Y3D5 142 aaKnown RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 L3MBTL1Q9Y468 752 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 OR10H1Q9Y4A9 318 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 SIRT4Q9Y6E7 314 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-203ENST00000554636 VPS13CQ709C8 3753 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 HEATR5AQ86XA9 2040 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 OTOGQ6ZRI0 2925 aa3.73□□□□□ -1.81
VTI1B-203ENST00000554636 PRRC2AP48634 2157 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 PRR14LQ5THK1 2151 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 ANK3Q12955 4377 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms