RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 H7C417 338 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF593O00488 134 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MSTNO14793 375 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 PIP5K1CO60331 668 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 PFDN1O60925 122 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DIRAS1O95057 198 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MT-ATP6P00846 226 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 LRG1P02750 347 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CT62P0C5K7 136 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 IFNGR1P15260 489 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RPS2P15880 293 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CTRB1P17538 263 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ATF1P18846 271 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TNFRSF1BP20333 461 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CD34P28906 385 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CD1CP29017 333 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 KIR3DL2P43630 455 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 VEGFBP49765 207 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CAPZA1P52907 286 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 HSD17B7P56937 341 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 FBXW4P57775 412 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 PITPNAQ00169 270 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SGCGQ13326 291 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SLC9A5Q14940 896 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ANGPT1Q15389 498 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SSX2Q16385 188 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DNLZQ5SXM8 178 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 FBXO46Q6PJ61 603 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 C16orf62Q7Z3J2 963 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GLB1L2Q8IW92 636 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SLC35F3Q8IY50 421 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF100Q8IYN0 542 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 LRTM2Q8N967 370 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CLEC1AQ8NC01 280 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 BBS1Q8NFJ9 593 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 OR5W2Q8NH69 310 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 OR56B4Q8NH76 319 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM255BQ8WV15 326 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM239Q8WW34 195 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 AKAP1Q92667 903 aaKnown RBP eCLIP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 C10orf35Q96D05 121 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MRGPRX1Q96LB2 322 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 FCRL4Q96PJ5 515 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 IL4I1Q96RQ9 567 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 EGFL8Q99944 293 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 BBS2Q9BXC9 721 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TRIM2Q9C040 744 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 KCNN2Q9H2S1 579 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 OR51B5Q9H339 312 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 OR52D1Q9H346 318 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 IFT22Q9H7X7 185 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 C20orf141Q9NUB4 165 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RHCGQ9UBD6 479 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SEC14L3Q9UDX4 400 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MTFP1Q9UDX5 166 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DUSP12Q9UNI6 340 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 U3KQA8 63 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 A0A1W2PS29 197 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 FAM25AB3EWG3 89 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 FAM25CB3EWG5 89 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 FAM25GB3EWG6 89 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 B8ZZF3 427 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GPR171O14626 319 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DVL2O14641 736 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RCBTB2O95199 551 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GBAP04062 536 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CHRNB1P11230 501 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TBPP20226 339 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MPIP34949 423 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ATXN3P54252 364 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ATP12AP54707 1039 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SLC37A1P57057 533 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DCAF7P61962 342 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 PUDPQ08623 228 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 KRT33BQ14525 404 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GUCA2BQ16661 112 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 NRN1LQ496H8 165 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ACSF3Q4G176 576 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ATAT1Q5SQI0 421 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 NKAIN2Q5VXU1 208 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF776Q68DI1 518 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 H3F3CQ6NXT2 135 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 LPCAT3Q6P1A2 487 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 COX15Q7KZN9 410 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CXXC5Q7LFL8 322 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 VRK2Q86Y07 508 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MCATQ8IVS2 390 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SFTPA1Q8IWL2 248 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DND1Q8IYX4 353 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GAPTQ8N292 157 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF561Q8N587 486 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ATG16L2Q8NAA4 619 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SYT14Q8NB59 555 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM185AQ8NFB2 350 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 LHFPL5Q8TAF8 219 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ST7LQ8TDW4 575 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RNF128Q8TEB7 428 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SLC41A2Q96JW4 573 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 NECTIN4Q96NY8 510 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms