RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 KIF25Q9UIL4 384 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 BOLA1Q9Y3E2 137 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SPO11Q9Y5K1 396 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TCRBV9S1A1TA0A576 114 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 LDLRAD4O15165 306 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TO15178 435 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 RP2O75695 350 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TRAPPC2P0DI81 140 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TRAPPC2BP0DI82 140 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 HOXB9P17482 250 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 DSC3Q14574 896 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PON3Q15166 354 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PPP1R3AQ16821 1122 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 FAM110CQ1W6H9 321 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SIRPB2Q5JXA9 342 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CNOT9Q92600 299 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 WBP2Q969T9 261 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 DUX5Q96PT3 197 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 KCNJ15Q99712 375 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 EBNA1BP2Q99848 306 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SEC14L4Q9UDX3 406 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ILVBLA1L0T0 632 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 COCHO43405 550 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DFNA5O60443 496 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 BPGMP07738 259 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HLA-GP17693 338 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RPL3P39023 403 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 LILRA3Q8N6C8 439 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM217Q8N7C4 229 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ADPRHL1Q8NDY3 354 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 OR4D10Q8NGI6 311 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 STON2Q8WXE9 905 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ADOQ96SZ5 270 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 P2RY12Q9H244 342 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 IL23AQ9NPF7 189 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 A0A087WV62 115 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 NAT1P18440 290 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TNFSF4P23510 183 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 NDUFS1P28331 727 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SLC1A3P43003 542 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 EBPQ15125 230 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 OR8G2PQ6IF36 304 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SCGB1D4Q6XE38 83 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 COMMD7Q86VX2 200 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 OCSTAMPQ9BR26 566 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RPP25Q9BUL9 199 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF385DQ9H6B1 395 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 EPHX3Q9H6B9 360 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 MCTS1Q9ULC4 181 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CXorf49A8MYA2 514 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RECKO95980 971 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 NUDT7P0C024 238 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SULT1A3P0DMM9 295 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SULT1A4P0DMN0 295 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DUSP3P51452 185 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ASTLQ6HA08 431 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PSAPL1Q6NUJ1 521 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 C22orf39Q6P5X5 142 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SFTPA2Q8IWL1 248 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SFTPA1Q8IWL2 248 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CLECL1Q8IZS7 167 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 NUP43Q8NFH3 380 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ENKD1Q9H0I2 346 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SUV39H2Q9H5I1 410 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 APOBEC3GQ9HC16 384 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PLEK2Q9NYT0 353 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ZIM2Q9NZV7 527 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PMP2P02689 132 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CAPNS1P04632 268 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 F13BP05160 661 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 GUSBP08236 651 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CPEP16870 476 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SNCAP37840 140 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CD81P60033 236 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RPL24P83731 157 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SBK1Q52WX2 424 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 LYPD8Q6UX82 237 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 OR1L4Q8NGR5 311 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 FNDC8Q8TC99 324 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CSPG4P5Q96PW8 444 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 MS4A12Q9NXJ0 267 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 A0A1W2PPV4 95 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 OR2M5A3KFT3 312 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ARPC1BO15143 372 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 POP4O95707 220 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HOXC13P31276 330 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SULT1A1P50225 295 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RPS14P62263 151 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TRIM28Q13263 835 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DUSP28Q4G0W2 176 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 FAM111BQ6SJ93 734 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ACMSDQ8TDX5 336 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RAB2BQ8WUD1 216 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 KCTD7Q96MP8 289 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 OR52B2Q96RD2 323 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 C12orf10Q9HB07 376 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ISYNA1Q9NPH2 558 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF391Q9UJN7 358 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PURGQ9UJV8 347 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms