RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 HLA-DMAP28067 261 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 SLC37A1P57057 533 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 EFNB1P98172 346 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CRYZQ08257 329 aaKnown RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ASAH1Q13510 395 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 SPHARQ15513 63 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 OCLNQ16625 522 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 TATDN3Q17R31 274 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 PGGHGQ32M88 737 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 GLYR1Q49A26 553 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 SHEQ5VZ18 495 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 PMS2CLQ68D20 193 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 PLBD1Q6P4A8 553 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 C19orf48Q6RUI8 117 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CBLN3Q6UW01 205 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 C9orf62Q8N4C0 152 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CYB561A3Q8NBI2 242 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 SLC2A12Q8TD20 617 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 GATAD2BQ8WXI9 593 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 OSTF1Q92882 214 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 FGF11Q92914 225 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF524Q96C55 264 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF501Q96CX3 271 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 C1GALT1C1Q96EU7 318 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 TBX5Q99593 518 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 TRAF4Q9BUZ4 470 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 RAB33BQ9H082 229 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 GAREM1Q9H706 876 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 IL20Q9NYY1 176 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 KLHL21Q9UJP4 597 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 SERTAD3Q9UJW9 196 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ALG5Q9Y673 324 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 SURF4O15260 269 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 CDRT1O95170 752 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 CLEC2LP0C7M8 214 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 PSMA1P25786 263 aaKnown RBP10.71□□□□□ -0.69
SHMT2-212ENST00000554467 EVI2BP34910 448 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 STAT5AP42229 794 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 SLC16A1P53985 500 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 TEKQ02763 1124 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 C22orf42Q6IC83 251 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 POMZP3Q6PJE2 187 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 OR2T33Q8NG76 320 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 SLC41A2Q96JW4 573 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 OR6C1Q96RD1 312 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 IFT27Q9BW83 186 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 NUDT9Q9BW91 350 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 RTN4RQ9BZR6 473 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 ANKRD19PQ9H560 264 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 HINT3Q9NQE9 182 aaKnown RBP10.71□□□□□ -0.69
SHMT2-212ENST00000554467 TESQ9UGI8 421 aaKnown RBP10.71□□□□□ -0.69
SHMT2-212ENST00000554467 GMEB2Q9UKD1 530 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 CDH10Q9Y6N8 788 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 A0A075B6Q4 140 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 A0A0B4J2E0 115 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 LY6G6EA0A0G2JKS1 128 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 A0A1B0GX12 115 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 SLC22A5O76082 557 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 CLUP10909 449 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 MTNR1AP48039 350 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 ATP12AP54707 1039 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 CDH11P55287 796 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 RHAGQ02094 409 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 TIGD3Q6B0B8 471 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 PHOSPHO1Q8TCT1 267 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 HOXB13Q92826 284 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-212ENST00000554467 TNFRSF13CQ96RJ3 184 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 VN1R1Q9GZP7 353 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 SLC22A4Q9H015 551 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 NIPAL2Q9H841 368 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 ERVMER34-1Q9H9K5 563 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 FBXL4Q9UKA2 621 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 PILRBQ9UKJ0 227 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 CFL2Q9Y281 166 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 MED31Q9Y3C7 131 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 SPIN1Q9Y657 262 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-212ENST00000554467 U3KQA8 63 aa10.71□□□□□ -0.69
SHMT2-212ENST00000554467 PCNX3Q9H6A9 2034 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 SLC35F4A4IF30 521 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 LAMTOR5O43504 91 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 SERPINI2O75830 405 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 GYPBP06028 91 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 MSL3P1P0C860 447 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 HPGDP15428 266 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 ATP6V1E1P36543 226 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 TIMM50Q3ZCQ8 353 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 PLK5Q496M5 336 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 KLHL12Q53G59 568 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 FAM131AQ6UXB0 335 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF367Q7RTV3 350 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 C7orf57Q8NEG2 295 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 OR8H1Q8NGG4 311 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 OR5M3Q8NGP4 307 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 ART5Q96L15 291 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF559Q9BR84 538 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 APMAPQ9HDC9 416 aa10.71□□□□□ -0.7
SHMT2-212ENST00000554467 ELF5Q9UKW6 265 aaPredicted RBP10.71□□□□□ -0.7
SHMT2-212ENST00000554467 SERINC4A6NH21 518 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 ARHGEF9O43307 516 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms