RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 BAG5Q9UL15 447 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 ZNF232Q9UNY5 417 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 KIAA1324LA8MWY0 1029 aaPredicted RBP12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 M0R3H8 397 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 SCDO00767 359 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 MSTNO14793 375 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 FRS3O43559 492 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 SCO2O43819 266 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 TPST2O60704 377 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 TNFSF13O75888 250 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 KRT36O76013 467 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 TGM6O95932 706 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 SRD5A2P31213 254 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 OR1E2P47887 323 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 VLDLRP98155 873 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 SKP2Q13309 424 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 OR5M10Q6IEU7 315 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 TSPYL5Q86VY4 417 aaPredicted RBP12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 CARM1Q86X55 608 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 UBQLNLQ8IYU4 475 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 ZNF527Q8NB42 609 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 GEMIN6Q8WXD5 167 aaKnown RBP12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 LZICQ8WZA0 190 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 POP5Q969H6 163 aaKnown RBP12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 PERPQ96FX8 193 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 WFIKKN1Q96NZ8 548 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 CCL19Q99731 98 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 PIP5K1AQ99755 562 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 S100A14Q9HCY8 104 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 ZNF226Q9NYT6 803 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 MED12Q93074 2177 aa12.56□□□□□ -0.4
SPTLC2-202ENST00000554365 DEFB108AA8MXU0 73 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 SIAH2O43255 324 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 FKBP6O75344 327 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 ANGPTL1O95841 491 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 CSTAP01040 98 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 MT-ND1P03886 318 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 RAP2AP10114 183 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 PRG2P13727 222 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 ZNF708P17019 499 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 FPR1P21462 350 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 PSMA4P25789 261 aaKnown RBP12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 ACAA2P42765 397 aaKnown RBP12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 CLDN18P56856 261 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 SIRPAP78324 504 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 ZNF117Q03924 483 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 ACKR1Q16570 336 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 VWA1Q6PCB0 445 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 CBLN3Q6UW01 205 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 FKBP9P1Q75LS8 142 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 PIWIL3Q7Z3Z3 882 aaKnown RBP12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 OR6T1Q8NGN1 323 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 PHOSPHO1Q8TCT1 267 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 PROX1Q92786 737 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 ZNF524Q96C55 264 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 DTNBP1Q96EV8 351 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 MDFIQ99750 246 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 MED18Q9BUE0 208 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 BDH2Q9BUT1 245 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 CHID1Q9BWS9 393 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 TBL1XR1Q9BZK7 514 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 AMBRA1Q9C0C7 1298 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 IL1RAPQ9NPH3 570 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 ARMC1Q9NVT9 282 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 NDUFAF4Q9P032 175 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 AURKCQ9UQB9 309 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 SLC35A3Q9Y2D2 325 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 SH3GLB1Q9Y371 365 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 WIF1Q9Y5W5 379 aa12.55□□□□□ -0.4
SPTLC2-202ENST00000554365 FN1P02751 2386 aaKnown RBP12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 IGLV3-32A0A0A0MS00 114 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 TRIM64A6NGJ6 449 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 TRIM64BA6NI03 449 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 HCRTR2O43614 444 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 NDUFB5O43674 189 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 MGRN1O60291 552 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 GKN3PP0CG01 181 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 UBL4AP11441 157 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 HPGDP15428 266 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 FUT4P22083 530 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 DPP4P27487 766 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 HTR2AP28223 471 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 CD79BP40259 229 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 HOXC5Q00444 222 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 CHRNB3Q05901 458 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 ZSWIM7Q19AV6 140 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 FAM98BQ52LJ0 330 aaKnown RBP12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 OR2A2Q6IF42 318 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 ZDHHC21Q8IVQ6 265 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 VANGL1Q8TAA9 524 aaPredicted RBP12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 STARD4Q96DR4 205 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 ZC3HAV1LQ96H79 300 aaKnown RBP12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 PRR14Q9BWN1 585 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 LAT2Q9GZY6 243 aa12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 OPN3Q9H1Y3 402 aaPredicted RBP12.54□□□□□ -0.4
SPTLC2-202ENST00000554365 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms