RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 GRINAQ7Z429 371 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 SPATA21Q7Z572 469 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 RELL1Q8IUW5 271 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 RIBC1Q8N443 379 aaPredicted RBP7.78□□□□□ -1.16
PRKCH-208ENST00000553846 POMGNT2Q8NAT1 580 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 SYT14Q8NB59 555 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 OR9K2Q8NGE7 335 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 TMEM234Q8WY98 164 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 PPCDCQ96CD2 204 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 ZHX1-C8orf76Q96EF9 292 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 FAHD2AQ96GK7 314 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 PAFAH2Q99487 392 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 MRPL37Q9BZE1 423 aaKnown RBP7.78□□□□□ -1.16
PRKCH-208ENST00000553846 NARFLQ9H6Q4 476 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 SERINC1Q9NRX5 453 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 ZNF275Q9NSD4 429 aaPredicted RBP7.78□□□□□ -1.16
PRKCH-208ENST00000553846 PARPBPQ9NWS1 579 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 TMEM181Q9P2C4 612 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 UPB1Q9UBR1 384 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 ZNF180Q9UJW8 692 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 SAR1BQ9Y6B6 198 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
PRKCH-208ENST00000553846 TENM3Q9P273 2699 aa7.77□□□□□ -1.16
PRKCH-208ENST00000553846 ZC3H12DA2A288 527 aaKnown RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 CCDC151A5D8V7 595 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 DNAJC9-AS1A6NH13 148 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 TRIM49D1C9J1S8 452 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 J3QLI3 93 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 AKAP10O43572 662 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 PLPP2O43688 288 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 SYNGR3O43761 229 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 EIF1BO60739 113 aaKnown RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 CSTAP01040 98 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 ERCC1P07992 297 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 GUSBP08236 651 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 UBTFL6P0CB48 400 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 CBR1P16152 277 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 PRTN3P24158 256 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 RFTN2Q52LD8 501 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 RNF165Q6ZSG1 346 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 DOK3Q7L591 496 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 TEX29Q8N6K0 151 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 ZNF614Q8N883 585 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 SPATA4Q8NEY3 305 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 OR5D16Q8NGK9 328 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 CLHC1Q8NHS4 586 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 RDH5Q92781 318 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 TAF15Q92804 592 aaKnown RBP eCLIP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 ARL8AQ96BM9 186 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 MTERF3Q96E29 417 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 ZNF75AQ96N20 296 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 ANKRD27Q96NW4 1050 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 TSSK3Q96PN8 268 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 ALKBH3Q96Q83 286 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 OR7D2Q96RA2 312 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 TUBB1Q9H4B7 451 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 PIF1Q9H611 641 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 NOX3Q9HBY0 568 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 DYNLRB1Q9NP97 96 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 MID1IP1Q9NPA3 183 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 MED29Q9NX70 200 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 MYEF2Q9P2K5 600 aaKnown RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 BAIAP2L1Q9UHR4 511 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 ATP6V1HQ9UI12 483 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 EMCNQ9ULC0 261 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
PRKCH-208ENST00000553846 SPIN1Q9Y657 262 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-208ENST00000553846 A0A0G2JMP0 313 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 A0A0X1KG70 313 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 TMEM72A0PK05 275 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 SH3PXD2BA1X283 911 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 LIPT2A6NK58 231 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 AQP7P3A6NL99 342 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 G3V2L1 256 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 M0R233 179 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 ANKRD28O15084 1053 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 ZNF208O43345 1280 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 UPK3AO75631 287 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 PRSS23O95084 383 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 GSNP06396 782 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
PRKCH-208ENST00000553846 TFPIP10646 304 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 CDH2P19022 906 aaPredicted RBP7.76□□□□□ -1.17
PRKCH-208ENST00000553846 FKBP2P26885 142 aaKnown RBP7.76□□□□□ -1.17
PRKCH-208ENST00000553846 GCAP28676 217 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 SELENOPP49908 381 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 SERPINB9P50453 376 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 TMEM33P57088 247 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 OR2B6P58173 313 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 SLC35A1P78382 337 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 FUT5Q11128 374 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 ZP4Q12836 540 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 SNTB2Q13425 540 aaKnown RBP7.76□□□□□ -1.17
PRKCH-208ENST00000553846 FXNQ16595 210 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 TIFABQ6ZNK6 161 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 FRMD7Q6ZUT3 714 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 RHOUQ7L0Q8 258 aa7.76□□□□□ -1.17
PRKCH-208ENST00000553846 SLC22A9Q8IVM8 553 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms