RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 CXCR1P25024 350 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 PTAFRP25105 342 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 MVDP53602 400 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 TGFBR3Q03167 851 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 FAPQ12884 760 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 VEZF1Q14119 521 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 LARS2Q15031 903 aaKnown RBP13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 CLEC12BQ2HXU8 276 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 SLC9B1Q4ZJI4 515 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 RNF220Q5VTB9 566 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 CXXC5Q7LFL8 322 aaKnown RBP13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 ATG4DQ86TL0 474 aaPredicted RBP13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 DTX2Q86UW9 622 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 CCDC103Q8IW40 242 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 C1orf162Q8NEQ5 155 aaPredicted RBP13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 OR52P1PQ8NH57 321 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 NEUROG1Q92886 237 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 TLCD1Q96CP7 247 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 DNAJA3Q96EY1 480 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 ADAM19Q9H013 955 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 BARX1Q9HBU1 254 aaPredicted RBP13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 NPAP1Q9NZP6 1156 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 UPB1Q9UBR1 384 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 DCTN4Q9UJW0 460 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 ZNF232Q9UNY5 417 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 FLVCR1Q9Y5Y0 555 aa13.33□□□□□ -0.28
SDR39U1-205ENST00000553546 A0A096LPI6 279 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 RAMP1O60894 148 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 IMPDH2P12268 514 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 ETFAP13804 333 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 TNK1Q13470 666 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 SLC17A1Q14916 467 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 PGGHGQ32M88 737 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 C6orf10Q5SRN2 563 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 AGAP6Q5VW22 663 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 WBP2NLQ6ICG8 309 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 ZNF836Q6ZNA1 936 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 DEPDC4Q8N2C3 294 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 MIER2Q8N344 545 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 C17orf78Q8N4C9 275 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 OR52N5Q8NH56 324 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 SPATA3Q8NHX4 192 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 TMEM45BQ96B21 275 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 MUS81Q96NY9 551 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 TRAF4Q9BUZ4 470 aaPredicted RBP13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 SF3B5Q9BWJ5 86 aaKnown RBP13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 TAPBPLQ9BX59 468 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 PIF1Q9H611 641 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 TMBIM4Q9HC24 238 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 SLC6A13Q9NSD5 602 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 RLIMQ9NVW2 624 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 ZNF443Q9Y2A4 671 aaPredicted RBP13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 IFT52Q9Y366 437 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 SLC25A15Q9Y619 301 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 TLN2Q9Y4G6 2542 aa13.32□□□□□ -0.28
SDR39U1-205ENST00000553546 A0A0G2JPF8 293 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 FAM234BA2RU67 622 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 HNRNPCL2B2RXH8 293 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 HNRNPCL3B7ZW38 293 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 HNRNPCL1O60812 293 aaKnown RBP13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 TFPTP0C1Z6 253 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 HNRNPCL4P0DMR1 293 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 CDKN1AP38936 164 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 STX1BP61266 288 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 MAPK11Q15759 364 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 GABRA6Q16445 453 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 NRF1Q16656 503 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 OTUD3Q5T2D3 398 aaPredicted RBP13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 PRAMEF8Q5VWM4 474 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 PRAMEF7Q5VXH5 474 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 MAVSQ7Z434 540 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 ABHD12BQ7Z5M8 362 aaPredicted RBP13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 VRK2Q86Y07 508 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 CADM2Q8N3J6 435 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 SLC38A5Q8WUX1 472 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 OR52B2Q96RD2 323 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 SPATA9Q9BWV2 254 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 AMBRA1Q9C0C7 1298 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 SLCO5A1Q9H2Y9 848 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 POU2F3Q9UKI9 436 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 AMDHD2Q9Y303 409 aa13.31□□□□□ -0.28
SDR39U1-205ENST00000553546 ZC3H12DA2A288 527 aaKnown RBP13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 LIPT2A6NK58 231 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 AQP7P3A6NL99 342 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 A8MVM7 634 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 PDLIM1O00151 329 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 ITGA5P08648 1049 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 GKN3PP0CG01 181 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 NCF2P19878 526 aaPredicted RBP13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 CD40P25942 277 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 PCSK6P29122 969 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 NTF4P34130 210 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 ACAA2P42765 397 aaKnown RBP13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 MRPL19P49406 292 aaKnown RBP13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 ZNF83P51522 516 aa13.3□□□□□ -0.28
SDR39U1-205ENST00000553546 FADDQ13158 208 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms