RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 FASTKQ14296 549 aaKnown RBP3.46□□□□□ -1.86
ATXN3-217ENST00000553287 PTPN20Q4JDL3 420 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 RESP18Q5W5W9 173 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 RAET1GQ6H3X3 334 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 IRGCQ6NXR0 463 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 SPATA19Q7Z5L4 167 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 SLFN11Q7Z7L1 901 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 NLRP14Q86W24 1093 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 SFRP1Q8N474 314 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 Q8N7P7 452 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 TMEM99Q8N816 258 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 ST6GALNAC3Q8NDV1 305 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 CATSPER1Q8NEC5 780 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 OR6F1Q8NGZ6 308 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 SETD6Q8TBK2 473 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 MRAPQ8TCY5 172 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF606Q8WXB4 792 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 SHC3Q92529 594 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 ISG20Q96AZ6 181 aaKnown RBP3.46□□□□□ -1.86
ATXN3-217ENST00000553287 NUS1Q96E22 293 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 CELF6Q96J87 481 aaKnown RBP3.46□□□□□ -1.86
ATXN3-217ENST00000553287 CNDP1Q96KN2 507 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 C9orf72Q96LT7 481 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 OR2M4Q96R27 311 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 NRTNQ99748 197 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 TMEM121Q9BTD3 319 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 LIME1Q9H400 295 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 CUTCQ9NTM9 273 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.46□□□□□ -1.86
ATXN3-217ENST00000553287 NEU3Q9UQ49 428 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 COQ4Q9Y3A0 265 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 FLNAP21333 2647 aaKnown RBP3.46□□□□□ -1.86
ATXN3-217ENST00000553287 CUBNO60494 3623 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 ABCA2Q9BZC7 2435 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 FER1L5A0AVI2 2057 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 PKDREJQ9NTG1 2253 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 FAM168BA1KXE4 195 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 TSPAN11A1L157 253 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 OR52A4PA6NMU1 304 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 CCL21O00585 134 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 CETN3O15182 167 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 SRPX2O60687 465 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-217ENST00000553287 SOD1P00441 154 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 APOA4P06727 396 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 CAPN1P07384 714 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 STSP08842 583 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 EPB41P11171 864 aaKnown RBP3.45□□□□□ -1.86
ATXN3-217ENST00000553287 SLC1A6P48664 564 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 STX17P56962 302 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 RPS15P62841 145 aaKnown RBP3.45□□□□□ -1.86
ATXN3-217ENST00000553287 RAD51Q06609 339 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF630Q2M218 657 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-217ENST00000553287 KRTAP13-3Q3SY46 172 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 PYCR3Q53H96 274 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 VWA2Q5GFL6 755 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 BRMS1LQ5PSV4 323 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 LINC00242Q5T6M2 205 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 TAF3Q5VWG9 929 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 RSBN1Q5VWQ0 802 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-217ENST00000553287 LYPLAL1Q5VWZ2 237 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 NEPROQ6NW34 567 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 IYDQ6PHW0 289 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 MYO7BQ6PIF6 2116 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 SYVN1Q86TM6 617 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 ZSCAN30Q86W11 494 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 ZGRF1Q86YA3 2104 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 ZNRF1Q8ND25 227 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-217ENST00000553287 NAT14Q8WUY8 206 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 SNX21Q969T3 373 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 RFT1Q96AA3 541 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 CRACR2AQ9BSW2 395 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 DHRS4-AS1Q9P1J3 65 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 OR12D3Q9UGF7 316 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 SLC23A2Q9UGH3 650 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 HPCAL4Q9UM19 191 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 BTRCQ9Y297 605 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 SLC17A4Q9Y2C5 497 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 MFHAS1Q9Y4C4 1052 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 NUP210LQ5VU65 1888 aa3.45□□□□□ -1.86
ATXN3-217ENST00000553287 MXRA5Q9NR99 2828 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 NSD1Q96L73 2696 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 HEATR9A2RTY3 570 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 ANKDD1BA6NHY2 528 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 C21orf140B9A014 251 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 HAT1O14929 419 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 ZW10O43264 779 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 STX10O60499 249 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 SELENOFO60613 162 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 SCRG1O75711 98 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 IVLP07476 585 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 HOXC4P09017 264 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 NELFEP18615 380 aaKnown RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 GPR1P46091 355 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 NPBWR1P48145 328 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 NDUFA8P51970 172 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 IST1P53990 364 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 MAXP61244 160 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 LYZP61626 148 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 CSNK1G2P78368 415 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms