RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NRN1LQ496H8 165 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 TRMT12Q53H54 448 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CT45A2Q5DJT8 189 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ARMCX4Q5H9R4 360 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ATPAF1Q5TC12 328 aaPredicted RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 SULT1C3Q6IMI6 304 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 SPATA21Q7Z572 469 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 MARCH3Q86UD3 253 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ZDHHC13Q8IUH4 622 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CCDC28AQ8IWP9 274 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 LAS2Q8IYD9 372 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 UBL4BQ8N7F7 174 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 OR7G3Q8NG95 312 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 APH1AQ96BI3 265 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF775Q96BV0 537 aaPredicted RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 EFHD2Q96C19 240 aaPredicted RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 COG8Q96MW5 612 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 PSD2Q9BQI7 771 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 KATNB1Q9BVA0 655 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 PCDHAC1Q9H158 963 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 GHITMQ9H3K2 345 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 HEATR1Q9H583 2144 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF665Q9H7R5 613 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 C3orf14Q9HBI5 128 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 TBC1D23Q9NUY8 699 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 PARPBPQ9NWS1 579 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 TAS2R9Q9NYW1 312 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 FAM30AQ9NZY2 134 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 UPB1Q9UBR1 384 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CTNNAL1Q9UBT7 734 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ZDHHC2Q9UIJ5 367 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 VDAC3Q9Y277 283 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 PLLPQ9Y342 182 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 OARD1Q9Y530 152 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 SAR1BQ9Y6B6 198 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 PRKDCP78527 4128 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 PPIAL4EA0A075B759 164 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 A0A0A6YYD5 115 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PPIAL4CA0A0B4J2A2 164 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 LOC102723971A0A1B0GUV8 181 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 C1orf226A1L170 272 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 FAM181BA6NEQ2 426 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 TMEM233B4DJY2 109 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PPIAL4DF5H284 164 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 DYNC1I1O14576 645 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF195O14628 629 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 AHCYL1O43865 530 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 MRPL33O75394 65 aaKnown RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 CLDN9O95484 217 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PPP1R3DO95685 299 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 TTC4O95801 387 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 ANGPTL1O95841 491 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 FSHBP01225 129 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 MYZAPP0CAP1 466 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PPIAL4FP0DN26 164 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 SFTPDP35247 375 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 SLC1A2P43004 574 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 EVX1P49640 407 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 CDKN2DP55273 166 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 UCP3P55916 312 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 RPL15P61313 204 aaKnown RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 BASP1P80723 227 aaKnown RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 TIAL1Q01085 375 aaKnown RBP eCLIP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 CUL3Q13618 768 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PDK3Q15120 406 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PDK4Q16654 411 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 TSTQ16762 297 aaKnown RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 HSP90AA5PQ58FG0 334 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 C11orf87Q6NUJ2 197 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 ANKRD16Q6P6B7 361 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 CCBE1Q6UXH8 406 aaPredicted RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PAGE2Q7Z2X7 111 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 PEX26Q7Z412 305 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 ADAMTSL2Q86TH1 951 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 NUDT13Q86X67 352 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 WFDC3Q8IUB2 231 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 SAMD14Q8IZD0 417 aaPredicted RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 ZCCHC24Q8N2G6 241 aaKnown RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 WDR31Q8NA23 367 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 TRPC4APQ8TEL6 797 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 CKAP2Q8WWK9 683 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 RNF145Q96MT1 663 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 NAP1L3Q99457 506 aaPredicted RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 GATA5Q9BWX5 397 aaPredicted RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF442Q9H7R0 627 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 SLC17A5Q9NRA2 495 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 C19orf73Q9NVV2 129 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 MAT2BQ9NZL9 334 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 OPN4Q9UHM6 478 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 UTS2RQ9UKP6 389 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 SNX12Q9UMY4 172 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 NOSIPQ9Y314 301 aaKnown RBP4.43□□□□□ -1.7
CKAP4-203ENST00000553039 TSC22D4Q9Y3Q8 395 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 AUP1Q9Y679 476 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 ARFGEF3Q5TH69 2177 aa4.43□□□□□ -1.7
CKAP4-203ENST00000553039 WNK2Q9Y3S1 2297 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 A0A1W2PRB8 838 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 TTC36A6NLP5 189 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 MIF4GDA9UHW6 222 aaKnown RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 B4DXG7 233 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms