RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 FUT5Q11128 374 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 FAPQ12884 760 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 GNA13Q14344 377 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 PPA1Q15181 289 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 RGNQ15493 299 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF141Q15928 474 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 SYPL1Q16563 259 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 NRF1Q16656 503 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 MMEL1Q495T6 779 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 PDZK1Q5T2W1 519 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 TYW3Q6IPR3 259 aaKnown RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 DLEU7Q6UYE1 221 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 LRRC74BQ6ZQY2 392 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 OLIG3Q7RTU3 272 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 PHC2Q8IXK0 858 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 ANKFN1Q8N957 763 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 OR10H5Q8NGA6 315 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 OR5W2Q8NH69 310 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 BCAS4Q8TDM0 211 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 OIT3Q8WWZ8 545 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 NANOS1Q8WY41 292 aaKnown RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 TMEM158Q8WZ71 300 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 PMM1Q92871 262 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 MUCL1Q96DR8 90 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 HS6ST2Q96MM7 605 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 SAP130Q9H0E3 1048 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 ALG2Q9H553 416 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 MTHFD2LQ9H903 347 aaPredicted RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 NPAP1Q9NZP6 1156 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 VAPAQ9P0L0 249 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 P2RX2Q9UBL9 471 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 PRSS50Q9UI38 385 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 CORO2BQ9UQ03 480 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 B3GALT5Q9Y2C3 310 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 GMEB1Q9Y692 573 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 CAPN7Q9Y6W3 813 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 CADP27708 2225 aa10.46□□□□□ -0.74
CKAP4-202ENST00000552828 TRBV5-3A0A0A0MS03 114 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 IGHV3-15A0A0B4J1V0 119 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 LOC100653049A0A140TA62 436 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 SERINC4A6NH21 518 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 SMAD9O15198 467 aaKnown RBP10.45□□□□□ -0.74
CKAP4-202ENST00000552828 KIAA0513O60268 411 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 SNX3O60493 162 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 UGT2B17O75795 530 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 LYZL6O75951 148 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 KRT34O76011 436 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 TFPTP0C1Z6 253 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 GGT1P19440 569 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 EDNRAP25101 427 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 SLC7A1P30825 629 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 DSCR9P59020 149 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 CHRNEQ04844 493 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 RASGEF1BQ0VAM2 473 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 NFYCQ13952 458 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 CHRFAM7AQ494W8 412 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 COQ5Q5HYK3 327 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 AGAP6Q5VW22 663 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 C11orf71Q6IPW1 123 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 FRRS1Q6ZNA5 592 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 DHDDSQ86SQ9 333 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 RETREG3Q86VR2 466 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 MSRB3Q8IXL7 192 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 TOR1AIP2Q8NFQ8 470 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 SLC38A5Q8WUX1 472 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 RHNO1Q9BSD3 238 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 CALML5Q9NZT1 146 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 ARMCX1Q9P291 453 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 KCNE5Q9UJ90 142 aa10.45□□□□□ -0.74
CKAP4-202ENST00000552828 IGHV4-30-2A0A087WSY4 118 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 IGKV3D-15A0A087WSY6 115 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 A0A1W2PNR3 127 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 OR5H1A6NKK0 313 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ELOA3DA6NLF2 546 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 BBIP1A8MTZ0 92 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 FBP2O00757 339 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ABCD4O14678 606 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF264O43296 627 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 SSX4O60224 188 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 GPRIN2O60269 458 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 CHRM4P08173 479 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 BMP2P12643 396 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 GPX2P18283 190 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 IGHV1-2P23083 117 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 TTKP33981 857 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 RNF144AP50876 292 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 CRISP3P54108 245 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 CDH11P55287 796 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 LOXL1Q08397 574 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 CBFBQ13951 182 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 CYLC2Q14093 348 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 PDK3Q15120 406 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 QPRTQ15274 297 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 STK11Q15831 433 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 NDUFAF6Q330K2 333 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ELOA3BQ3SY89 546 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 RUNDC3AQ59EK9 446 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 C3orf33Q6P1S2 294 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms