RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 A0A1B0GU03 582 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 A8MXQ7 604 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 DCTN6O00399 190 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 OR7A10O76100 309 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 H6PDO95479 791 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 LALBAP00709 142 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 SERPIND1P05546 499 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 ATP5C1P36542 298 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 MAGEA1P43355 309 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 NAMPTP43490 491 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 RPS5P46782 204 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 SLC11A1P49279 550 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 CSNK1EP49674 416 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 KPNA2P52292 529 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 EIF3EP60228 445 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 RPL32P62910 135 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 KCNJ2P63252 427 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 SCRN3Q0VDG4 424 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 ASPHQ12797 758 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 TGIF1Q15583 401 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 MRPL23Q16540 153 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 KLHL40Q2TBA0 621 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 GLYR1Q49A26 553 aaPredicted RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 PGAP1Q75T13 922 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 CENPQQ7L2Z9 268 aaPredicted RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 NIPA1Q7RTP0 329 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 HIPK1Q86Z02 1210 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 ERI1Q8IV48 349 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 NUDCD3Q8IVD9 361 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 CCDC65Q8IXS2 484 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 MCOLN2Q8IZK6 566 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 FBXL16Q8N461 479 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 ZNF321PQ8N8H1 164 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 PLPPR1Q8TBJ4 325 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 ISG20Q96AZ6 181 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 NOL4LQ96MY1 436 aaPredicted RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 TSNARE1Q96NA8 513 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 P2RY13Q9BPV8 354 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 C20orf24Q9BUV8 137 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 DNTTIP1Q9H147 329 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 THUMPD1Q9NXG2 353 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 CLEC5AQ9NY25 188 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 WWOXQ9NZC7 414 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 PDP1Q9P0J1 537 aaPredicted RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 ZNF581Q9P0T4 197 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 OR1A1Q9P1Q5 309 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 PEF1Q9UBV8 284 aaKnown RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 PITPNC1Q9UKF7 332 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 TBC1D24Q9ULP9 559 aa3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 PACSIN2Q9UNF0 486 aaPredicted RBP3.13□□□□□ -1.91
LSM6P2-201ENST00000552208 TNIKQ9UKE5 1360 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 IGKV1D-8A0A087WSZ0 117 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 ARPC4-TTLL3A0A0A6YYG9 625 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 IGHV3-35A0A0C4DH35 117 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 OR5B21A6NL26 309 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 HIP1O00291 1037 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 CLOCKO15516 846 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 GALR3O60755 368 aaPredicted RBP3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 SLITRK3O94933 977 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 STAMBPO95630 424 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 STSP08842 583 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 CCNB1P14635 433 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 IGLL1P15814 213 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 GATA1P15976 413 aaPredicted RBP3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 CALCRP30988 508 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 YAP1P46937 504 aaKnown RBP3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 PKNOX1P55347 436 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 OR5I1Q13606 314 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 DOC2AQ14183 400 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 GNMTQ14749 295 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 VPS26BQ4G0F5 336 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 KLF17Q5JT82 389 aaPredicted RBP3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 PIP5KL1Q5T9C9 394 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 OR52E8Q6IFG1 317 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 TMEM53Q6P2H8 277 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 CXCL17Q6UXB2 119 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 C19orf35Q6ZS72 473 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 ACOT7LQ6ZUV0 252 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 GPRIN3Q6ZVF9 776 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 EIF3MQ7L2H7 374 aaKnown RBP3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 GPR65Q8IYL9 337 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 B3GNT7Q8NFL0 401 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 ZNF707Q96C28 371 aaPredicted RBP3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 ZNF578Q96N58 590 aaPredicted RBP3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 KLHDC3Q9BQ90 382 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 ANKRD60Q9BZ19 345 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 RBKSQ9H477 322 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 CLSTN2Q9H4D0 955 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 MDFICQ9P1T7 246 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 COPS3Q9UNS2 423 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 KCNIP3Q9Y2W7 256 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 PLEKHH1Q9ULM0 1364 aa3.12□□□□□ -1.91
LSM6P2-201ENST00000552208 SMCO3A2RU48 225 aa3.11□□□□□ -1.91
LSM6P2-201ENST00000552208 TUBAL3A6NHL2 446 aa3.11□□□□□ -1.91
LSM6P2-201ENST00000552208 KRTAP16-1A8MUX0 517 aa3.11□□□□□ -1.91
LSM6P2-201ENST00000552208 PSTPIP1O43586 416 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms